Class: QualityMetrics

Quality metrics for experiments

classDiagram class QualityMetrics click QualityMetrics href "../QualityMetrics/" QualityMetrics : completeness QualityMetrics : i_zero QualityMetrics : r_factor QualityMetrics : resolution QualityMetrics : rg QualityMetrics : signal_to_noise

Slots

Name	Cardinality and Range	Description	Inheritance
resolution	0..1 Float	Resolution in Angstroms	direct
completeness	0..1 Float	Data completeness percentage	direct
signal_to_noise	0..1 Float	Signal to noise ratio	direct
r_factor	0..1 Float	R-factor for crystallography	direct
i_zero	0..1 Float	Forward scattering intensity I(0)	direct
rg	0..1 Float	Radius of gyration in Angstroms	direct

Usages

used by	used in	type	used
ExperimentRun	quality_metrics	range	QualityMetrics

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/biostride/

Mappings

Mapping Type	Mapped Value
self	biostride_schema:QualityMetrics
native	biostride_schema:QualityMetrics

LinkML Source

Direct

name: QualityMetrics
description: Quality metrics for experiments
from_schema: https://w3id.org/biostride/
attributes:
  resolution:
    name: resolution
    description: Resolution in Angstroms
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float
  completeness:
    name: completeness
    description: Data completeness percentage
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float
  signal_to_noise:
    name: signal_to_noise
    description: Signal to noise ratio
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float
  r_factor:
    name: r_factor
    description: R-factor for crystallography
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float
  i_zero:
    name: i_zero
    description: Forward scattering intensity I(0)
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float
  rg:
    name: rg
    description: Radius of gyration in Angstroms
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - QualityMetrics
    range: float

Induced

name: QualityMetrics
description: Quality metrics for experiments
from_schema: https://w3id.org/biostride/
attributes:
  resolution:
    name: resolution
    description: Resolution in Angstroms
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: resolution
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float
  completeness:
    name: completeness
    description: Data completeness percentage
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: completeness
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float
  signal_to_noise:
    name: signal_to_noise
    description: Signal to noise ratio
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: signal_to_noise
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float
  r_factor:
    name: r_factor
    description: R-factor for crystallography
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: r_factor
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float
  i_zero:
    name: i_zero
    description: Forward scattering intensity I(0)
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: i_zero
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float
  rg:
    name: rg
    description: Radius of gyration in Angstroms
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: rg
    owner: QualityMetrics
    domain_of:
    - QualityMetrics
    range: float