Class: SamplePreparation

A process that prepares a sample for imaging

classDiagram class SamplePreparation click SamplePreparation href "../SamplePreparation/" NamedThing <|-- SamplePreparation click NamedThing href "../NamedThing/" SamplePreparation : description SamplePreparation : id SamplePreparation : operator_id SamplePreparation : preparation_date SamplePreparation : preparation_type SamplePreparation --> "1" PreparationTypeEnum : preparation_type click PreparationTypeEnum href "../PreparationTypeEnum/" SamplePreparation : protocol_description SamplePreparation : sample_id SamplePreparation : title

Inheritance

NamedThing
- SamplePreparation

Slots

Name	Cardinality and Range	Description	Inheritance
preparation_type	1 PreparationTypeEnum	Type of sample preparation	direct
sample_id	1 String	Reference to the sample being prepared	direct
preparation_date	0..1 String	Date of sample preparation	direct
operator_id	0..1 String	Person who performed the preparation	direct
protocol_description	0..1 String	Detailed protocol description	direct
id	1 Uriorcurie		NamedThing
title	0..1 String		NamedThing
description	0..1 String		NamedThing

Usages

used by	used in	type	used
Study	sample_preparations	range	SamplePreparation

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/biostride/

Mappings

Mapping Type	Mapped Value
self	biostride_schema:SamplePreparation
native	biostride_schema:SamplePreparation

LinkML Source

Direct

name: SamplePreparation
description: A process that prepares a sample for imaging
from_schema: https://w3id.org/biostride/
is_a: NamedThing
attributes:
  preparation_type:
    name: preparation_type
    description: Type of sample preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - SamplePreparation
    range: PreparationTypeEnum
    required: true
  sample_id:
    name: sample_id
    description: Reference to the sample being prepared
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
    required: true
  preparation_date:
    name: preparation_date
    description: Date of sample preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - SamplePreparation
    range: string
  operator_id:
    name: operator_id
    description: Person who performed the preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
  protocol_description:
    name: protocol_description
    description: Detailed protocol description
    from_schema: https://w3id.org/biostride/
    rank: 1000
    domain_of:
    - SamplePreparation

Induced

name: SamplePreparation
description: A process that prepares a sample for imaging
from_schema: https://w3id.org/biostride/
is_a: NamedThing
attributes:
  preparation_type:
    name: preparation_type
    description: Type of sample preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: preparation_type
    owner: SamplePreparation
    domain_of:
    - SamplePreparation
    range: PreparationTypeEnum
    required: true
  sample_id:
    name: sample_id
    description: Reference to the sample being prepared
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: sample_id
    owner: SamplePreparation
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
    required: true
  preparation_date:
    name: preparation_date
    description: Date of sample preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: preparation_date
    owner: SamplePreparation
    domain_of:
    - SamplePreparation
    range: string
  operator_id:
    name: operator_id
    description: Person who performed the preparation
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: operator_id
    owner: SamplePreparation
    domain_of:
    - SamplePreparation
    - ExperimentRun
    range: string
  protocol_description:
    name: protocol_description
    description: Detailed protocol description
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: protocol_description
    owner: SamplePreparation
    domain_of:
    - SamplePreparation
    range: string
  id:
    name: id
    from_schema: https://w3id.org/biostride/
    rank: 1000
    identifier: true
    alias: id
    owner: SamplePreparation
    domain_of:
    - NamedThing
    - OntologyTerm
    range: uriorcurie
    required: true
  title:
    name: title
    from_schema: https://w3id.org/biostride/
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: SamplePreparation
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    from_schema: https://w3id.org/biostride/
    rank: 1000
    alias: description
    owner: SamplePreparation
    domain_of:
    - NamedThing
    range: string