Class: DwSamples
URI: gold:DwSamples
classDiagram
class DwSamples
click DwSamples href "../DwSamples/"
DwSamples : absorbance_260_230
DwSamples : absorbance_260_280
DwSamples : collabor_concentration_ngul
DwSamples : collabor_volume_ul
DwSamples : collection_altit_depth_meters
DwSamples : collection_latitude
DwSamples : collection_longitude
DwSamples : collection_site_growth
DwSamples : collection_time
DwSamples : created_by_id
DwSamples : created_by_name
DwSamples : culture_strain_pure_descr
DwSamples : current_concentration_ngul
DwSamples : current_status
DwSamples : current_volume_ul
DwSamples : date_created
DwSamples : developmental_stage_age
DwSamples : dna_isolation_method
DwSamples : dna_treated
DwSamples : gls_sample_id
DwSamples : group_name
DwSamples : in_vivo_conditions
DwSamples : last_updated
DwSamples : last_updated_by_id
DwSamples : last_updated_by_name
DwSamples : material_type
DwSamples : max_depth_meters
DwSamples : max_elevation_meters
DwSamples : max_insert_size_kb
DwSamples : min_depth_meters
DwSamples : min_elevation_meters
DwSamples : number_tubes_plates
DwSamples : pathogenicity
DwSamples : plate_location
DwSamples : qc_status
DwSamples : qc_total_mass_ng
DwSamples : risk_group_level
DwSamples : sample_format
DwSamples : sample_id
DwSamples : sample_isolated_from
DwSamples : sample_name
DwSamples : sample_tube_barcode
DwSamples : sex
DwSamples : shipment_storage_comments
DwSamples : source_sample_pid
DwSamples : starting_culture_pure
DwSamples : status_comments
DwSamples : status_date
DwSamples : storage_solution
DwSamples : tissue_organ_source
DwSamples : tube_plate_label
DwSamples : vector_name
Slots
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/jgi/gold
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | gold:DwSamples |
| native | gold:DwSamples |
LinkML Source
Direct
name: dw_samples
from_schema: https://w3id.org/jgi/gold
attributes:
sample_id:
name: sample_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: integer
required: false
gls_sample_id:
name: gls_sample_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
sample_name:
name: sample_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
collection_time:
name: collection_time
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: datetime
required: false
collection_latitude:
name: collection_latitude
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
collection_longitude:
name: collection_longitude
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
collection_altit_depth_meters:
name: collection_altit_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
min_depth_meters:
name: min_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
max_depth_meters:
name: max_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
min_elevation_meters:
name: min_elevation_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
max_elevation_meters:
name: max_elevation_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
collection_site_growth:
name: collection_site_growth
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
dna_isolation_method:
name: dna_isolation_method
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
current_concentration_ngul:
name: current_concentration_ngul
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
tube_plate_label:
name: tube_plate_label
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
plate_location:
name: plate_location
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
number_tubes_plates:
name: number_tubes_plates
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
shipment_storage_comments:
name: shipment_storage_comments
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
dna_treated:
name: dna_treated
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
starting_culture_pure:
name: starting_culture_pure
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
culture_strain_pure_descr:
name: culture_strain_pure_descr
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
tissue_organ_source:
name: tissue_organ_source
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
developmental_stage_age:
name: developmental_stage_age
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
sex:
name: sex
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
in_vivo_conditions:
name: in_vivo_conditions
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
vector_name:
name: vector_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
date_created:
name: date_created
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: datetime
required: false
last_updated:
name: last_updated
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: datetime
required: false
status_date:
name: status_date
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_project
range: datetime
required: false
status_comments:
name: status_comments
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_project
range: string
required: false
absorbance_260_230:
name: absorbance_260_230
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
sample_isolated_from:
name: sample_isolated_from
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
qc_total_mass_ng:
name: qc_total_mass_ng
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
max_insert_size_kb:
name: max_insert_size_kb
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
qc_status:
name: qc_status
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
sample_tube_barcode:
name: sample_tube_barcode
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
collabor_volume_ul:
name: collabor_volume_ul
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
collabor_concentration_ngul:
name: collabor_concentration_ngul
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
pathogenicity:
name: pathogenicity
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- organism_v2
range: string
required: false
risk_group_level:
name: risk_group_level
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: integer
required: false
absorbance_260_280:
name: absorbance_260_280
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
current_volume_ul:
name: current_volume_ul
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: float
required: false
group_name:
name: group_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
created_by_id:
name: created_by_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: integer
required: false
created_by_name:
name: created_by_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: string
required: false
last_updated_by_id:
name: last_updated_by_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: integer
required: false
last_updated_by_name:
name: last_updated_by_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: string
required: false
current_status:
name: current_status
from_schema: https://w3id.org/jgi/gold
domain_of:
- dw_analysis_project
- dw_samples
- dw_sequencing_project
range: string
required: false
storage_solution:
name: storage_solution
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
sample_format:
name: sample_format
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
material_type:
name: material_type
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
- dw_sequencing_project
range: string
required: false
source_sample_pid:
name: source_sample_pid
from_schema: https://w3id.org/jgi/gold
rank: 1000
domain_of:
- dw_samples
range: string
required: false
Induced
name: dw_samples
from_schema: https://w3id.org/jgi/gold
attributes:
sample_id:
name: sample_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sample_id
owner: dw_samples
domain_of:
- dw_samples
range: integer
required: false
gls_sample_id:
name: gls_sample_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: gls_sample_id
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
sample_name:
name: sample_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sample_name
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
collection_time:
name: collection_time
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collection_time
owner: dw_samples
domain_of:
- dw_samples
range: datetime
required: false
collection_latitude:
name: collection_latitude
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collection_latitude
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
collection_longitude:
name: collection_longitude
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collection_longitude
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
collection_altit_depth_meters:
name: collection_altit_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collection_altit_depth_meters
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
min_depth_meters:
name: min_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: min_depth_meters
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
max_depth_meters:
name: max_depth_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: max_depth_meters
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
min_elevation_meters:
name: min_elevation_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: min_elevation_meters
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
max_elevation_meters:
name: max_elevation_meters
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: max_elevation_meters
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
collection_site_growth:
name: collection_site_growth
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collection_site_growth
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
dna_isolation_method:
name: dna_isolation_method
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: dna_isolation_method
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
current_concentration_ngul:
name: current_concentration_ngul
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: current_concentration_ngul
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
tube_plate_label:
name: tube_plate_label
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: tube_plate_label
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
plate_location:
name: plate_location
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: plate_location
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
number_tubes_plates:
name: number_tubes_plates
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: number_tubes_plates
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
shipment_storage_comments:
name: shipment_storage_comments
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: shipment_storage_comments
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
dna_treated:
name: dna_treated
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: dna_treated
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
starting_culture_pure:
name: starting_culture_pure
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: starting_culture_pure
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
culture_strain_pure_descr:
name: culture_strain_pure_descr
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: culture_strain_pure_descr
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
tissue_organ_source:
name: tissue_organ_source
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: tissue_organ_source
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
developmental_stage_age:
name: developmental_stage_age
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: developmental_stage_age
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
sex:
name: sex
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sex
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
in_vivo_conditions:
name: in_vivo_conditions
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: in_vivo_conditions
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
vector_name:
name: vector_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: vector_name
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
date_created:
name: date_created
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: date_created
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: datetime
required: false
last_updated:
name: last_updated
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: last_updated
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: datetime
required: false
status_date:
name: status_date
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: status_date
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_project
range: datetime
required: false
status_comments:
name: status_comments
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: status_comments
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_project
range: string
required: false
absorbance_260_230:
name: absorbance_260_230
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: absorbance_260_230
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
sample_isolated_from:
name: sample_isolated_from
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sample_isolated_from
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
qc_total_mass_ng:
name: qc_total_mass_ng
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: qc_total_mass_ng
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
max_insert_size_kb:
name: max_insert_size_kb
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: max_insert_size_kb
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
qc_status:
name: qc_status
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: qc_status
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
sample_tube_barcode:
name: sample_tube_barcode
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sample_tube_barcode
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
collabor_volume_ul:
name: collabor_volume_ul
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collabor_volume_ul
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
collabor_concentration_ngul:
name: collabor_concentration_ngul
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: collabor_concentration_ngul
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
pathogenicity:
name: pathogenicity
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: pathogenicity
owner: dw_samples
domain_of:
- dw_samples
- organism_v2
range: string
required: false
risk_group_level:
name: risk_group_level
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: risk_group_level
owner: dw_samples
domain_of:
- dw_samples
range: integer
required: false
absorbance_260_280:
name: absorbance_260_280
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: absorbance_260_280
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
current_volume_ul:
name: current_volume_ul
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: current_volume_ul
owner: dw_samples
domain_of:
- dw_samples
range: float
required: false
group_name:
name: group_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: group_name
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
created_by_id:
name: created_by_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: created_by_id
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: integer
required: false
created_by_name:
name: created_by_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: created_by_name
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: string
required: false
last_updated_by_id:
name: last_updated_by_id
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: last_updated_by_id
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: integer
required: false
last_updated_by_name:
name: last_updated_by_name
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: last_updated_by_name
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_product
- dw_sequencing_project
range: string
required: false
current_status:
name: current_status
from_schema: https://w3id.org/jgi/gold
alias: current_status
owner: dw_samples
domain_of:
- dw_analysis_project
- dw_samples
- dw_sequencing_project
range: string
required: false
storage_solution:
name: storage_solution
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: storage_solution
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
sample_format:
name: sample_format
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: sample_format
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false
material_type:
name: material_type
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: material_type
owner: dw_samples
domain_of:
- dw_samples
- dw_sequencing_project
range: string
required: false
source_sample_pid:
name: source_sample_pid
from_schema: https://w3id.org/jgi/gold
rank: 1000
alias: source_sample_pid
owner: dw_samples
domain_of:
- dw_samples
range: string
required: false