Class: OrganismV2

URI: gold:OrganismV2

classDiagram class OrganismV2 click OrganismV2 href "../OrganismV2/" OrganismV2 : active OrganismV2 : add_date OrganismV2 : admin_ap_count OrganismV2 : admin_sp_count OrganismV2 : altitude OrganismV2 : altitude2 OrganismV2 : annotator_comments OrganismV2 : bicarbonate_millimol OrganismV2 : biosafety_level OrganismV2 : biosample_id OrganismV2 --> "0..1" Biosample : biosample_id click Biosample href "../Biosample/" OrganismV2 : carbon_source OrganismV2 : cell_diameter OrganismV2 : cell_length OrganismV2 : cell_shape OrganismV2 : chlorophyll_concentration OrganismV2 : clade OrganismV2 : color OrganismV2 --> "0..1" Cvcolor : color click Cvcolor href "../Cvcolor/" OrganismV2 : comments OrganismV2 : commercial OrganismV2 : commercial_comments OrganismV2 : common_name OrganismV2 : cruise_line_name OrganismV2 : culture_collection_id OrganismV2 : culture_type OrganismV2 : cultured OrganismV2 : depth OrganismV2 : depth2 OrganismV2 : domain OrganismV2 : ecosystem OrganismV2 : ecosystem_category OrganismV2 : ecosystem_path_id OrganismV2 : ecosystem_subtype OrganismV2 : ecosystem_type OrganismV2 : ecotype OrganismV2 : elevation OrganismV2 : elevation2 OrganismV2 : encoded_traits OrganismV2 : env_broad_scale OrganismV2 : env_local_scale OrganismV2 : env_medium OrganismV2 : exemplar_doi OrganismV2 : exemplar_name OrganismV2 : genbank_16s_id OrganismV2 : genus OrganismV2 : genus_synonyms OrganismV2 : geographic_location OrganismV2 : gold_class OrganismV2 : gold_family OrganismV2 : gold_id OrganismV2 : gold_order OrganismV2 : gold_phylogeny OrganismV2 : gram_stain OrganismV2 : growth_conditions OrganismV2 : growth_temperature OrganismV2 : growth_temperature2 OrganismV2 : h2s_millimol OrganismV2 : h2s_present OrganismV2 : health_disease_stat OrganismV2 : host_age OrganismV2 : host_body_product OrganismV2 : host_body_product_id OrganismV2 : host_body_site OrganismV2 : host_body_site_id OrganismV2 : host_body_subsite OrganismV2 : host_body_subsite_id OrganismV2 : host_comments OrganismV2 : host_gender OrganismV2 : host_health_condition OrganismV2 : host_medication OrganismV2 : host_name OrganismV2 : host_race OrganismV2 : host_specificity OrganismV2 : host_taxonomy_id OrganismV2 : hydrocarbon_core_package_id OrganismV2 : hydrocarbon_fs_package_id OrganismV2 : img_breadth_calc OrganismV2 : irradiance OrganismV2 : is_draft OrganismV2 : is_public OrganismV2 : is_test OrganismV2 : is_virocell OrganismV2 : isolation_publication_id OrganismV2 : isolation_pubmed_id OrganismV2 : its_growth_conditions OrganismV2 : known_non_hosts OrganismV2 : lat_long_inferred OrganismV2 : latitude OrganismV2 : latitude_test OrganismV2 : legacy_depth_data OrganismV2 : longhurst_code OrganismV2 : longitude OrganismV2 : longitude_test OrganismV2 : master_group_id OrganismV2 --> "0..1" OrganismV2 : master_group_id click OrganismV2 href "../OrganismV2/" OrganismV2 : methane_conc_millimol OrganismV2 : microbial_mat_package_id OrganismV2 : mod_by OrganismV2 : mod_date OrganismV2 : motility OrganismV2 : mrn OrganismV2 : ncbi_biosample_id OrganismV2 : ncbi_class OrganismV2 : ncbi_family OrganismV2 : ncbi_genus OrganismV2 : ncbi_kingdom OrganismV2 : ncbi_order OrganismV2 : ncbi_phylum OrganismV2 : ncbi_species OrganismV2 : ncbi_superkingdom OrganismV2 : ncbi_taxonomy_id OrganismV2 : ncbi_taxonomy_name OrganismV2 : nitrate_concentration OrganismV2 : organism_id OrganismV2 : organism_name OrganismV2 : organism_type OrganismV2 --> "0..1" CvorganismType : organism_type click CvorganismType href "../CvorganismType/" OrganismV2 : other_ecosystem OrganismV2 : other_hosts OrganismV2 : other_names OrganismV2 : oxygen_concentration OrganismV2 : oxygen_requirement OrganismV2 : package_built_environment_id OrganismV2 : package_host_associated_id OrganismV2 : package_human_associated_id OrganismV2 : package_wastewater_id OrganismV2 : pathogenicity OrganismV2 : patient_visit_number OrganismV2 : ph OrganismV2 : ph1 OrganismV2 : ph2 OrganismV2 : plant_package_id OrganismV2 : ploidy OrganismV2 : pressure OrganismV2 : project_oid OrganismV2 : propagation OrganismV2 : proport_isolation OrganismV2 : proport_ocean OrganismV2 : proport_station OrganismV2 : proport_woa_dissolved_oxygen OrganismV2 : proport_woa_nitrate OrganismV2 : proport_woa_phosphate OrganismV2 : proport_woa_salinity OrganismV2 : proport_woa_silicate OrganismV2 : proport_woa_temperature OrganismV2 : public_ap_count OrganismV2 : public_sp_count OrganismV2 : replicate_number OrganismV2 : salinity OrganismV2 : salinity_concentration OrganismV2 : sample_biomass OrganismV2 : sample_collection_day OrganismV2 : sample_collection_hour OrganismV2 : sample_collection_minute OrganismV2 : sample_collection_month OrganismV2 : sample_collection_site OrganismV2 : sample_collection_temperature OrganismV2 : sample_collection_temperature2 OrganismV2 : sample_collection_year OrganismV2 : sample_conductivity OrganismV2 : sample_contact_email OrganismV2 : sample_contact_name OrganismV2 : sample_isolation_comments OrganismV2 : sample_isolation_country_id OrganismV2 : sample_oid OrganismV2 : sample_volume OrganismV2 : sampling_strategy OrganismV2 : sediment_package_id OrganismV2 : serovar OrganismV2 : soil_curr_land_use OrganismV2 : soil_curr_vegetation OrganismV2 : soil_curr_vegetation_method OrganismV2 : soil_package_id OrganismV2 --> "0..1" PackageSoil : soil_package_id click PackageSoil href "../PackageSoil/" OrganismV2 : soil_prev_land_use OrganismV2 : soil_sample_biomass OrganismV2 : soil_sample_volume OrganismV2 : soluble_iron_micromol OrganismV2 : source OrganismV2 : species OrganismV2 : species_synonyms OrganismV2 : specific_ecosystem OrganismV2 : specimen OrganismV2 : sporulation OrganismV2 : strain OrganismV2 : strain_info_id OrganismV2 : straininfo_group_id OrganismV2 : submit_biosample_name OrganismV2 : submit_organism_name OrganismV2 : submitter_id OrganismV2 : subspecies OrganismV2 : subsurface_depth OrganismV2 : subsurface_depth1 OrganismV2 : subsurface_depth2 OrganismV2 : symbiont_name OrganismV2 : symbiont_taxon_id OrganismV2 : symbiotic_physical_interaction OrganismV2 : symbiotic_relationship OrganismV2 : tax_class_method OrganismV2 : tax_ident OrganismV2 : taxon_doi OrganismV2 : taxonomy_status OrganismV2 : temperature_range OrganismV2 : tot_nitrogen OrganismV2 : tot_org_carbon OrganismV2 : type_strain OrganismV2 : uncultured_type OrganismV2 : viral_group OrganismV2 : viral_subgroup OrganismV2 : virus_enrich_appr OrganismV2 : water_package_id

Slots

Name	Cardinality and Range	Description	Inheritance
organism_id	0..1 Float		direct
active	0..1 String		direct
is_public	0..1 String		direct
add_date	0..1 Datetime		direct
mod_date	0..1 Datetime		direct
mod_by	0..1 Float		direct
gold_id	0..1 String		direct
organism_name	0..1 String		direct
genus	0..1 String		direct
species	0..1 String		direct
subspecies	0..1 String		direct
strain	0..1 String		direct
serovar	0..1 String		direct
culture_collection_id	0..1 String		direct
type_strain	0..1 String		direct
domain	0..1 String		direct
gold_phylogeny	0..1 String		direct
ncbi_taxonomy_id	0..1 Float		direct
ncbi_taxonomy_name	0..1 String		direct
ncbi_superkingdom	0..1 String		direct
ncbi_kingdom	0..1 String		direct
ncbi_phylum	0..1 String		direct
ncbi_class	0..1 String		direct
ncbi_order	0..1 String		direct
ncbi_family	0..1 String		direct
ncbi_genus	0..1 String		direct
ncbi_species	0..1 String		direct
genbank_16s_id	0..1 String		direct
clade	0..1 String		direct
tax_class_method	0..1 String		direct
organism_type	0..1 CvorganismType	Foreign key to cvorganism_type	direct
cultured	0..1 String		direct
culture_type	0..1 String		direct
uncultured_type	0..1 String		direct
other_names	0..1 String		direct
genus_synonyms	0..1 String		direct
species_synonyms	0..1 String		direct
ecotype	0..1 String		direct
common_name	0..1 String		direct
master_group_id	0..1 OrganismV2	Foreign key to organism_v2	direct
submitter_id	0..1 Float		direct
sample_collection_site	0..1 String		direct
sample_isolation_country_id	0..1 Float		direct
geographic_location	0..1 String		direct
latitude	0..1 Float		direct
longitude	0..1 Float		direct
lat_long_inferred	0..1 String		direct
isolation_publication_id	0..1 Float		direct
isolation_pubmed_id	0..1 Float		direct
sample_isolation_comments	0..1 String		direct
sample_collection_day	0..1 Float		direct
sample_collection_month	0..1 Float		direct
sample_collection_year	0..1 Float		direct
sample_collection_hour	0..1 Float		direct
sample_collection_minute	0..1 Float		direct
ecosystem_path_id	0..1 Float		direct
ecosystem	0..1 String		direct
ecosystem_category	0..1 String		direct
ecosystem_type	0..1 String		direct
ecosystem_subtype	0..1 String		direct
specific_ecosystem	0..1 String		direct
other_ecosystem	0..1 String		direct
gram_stain	0..1 String		direct
oxygen_requirement	0..1 String		direct
carbon_source	0..1 String		direct
cell_shape	0..1 String		direct
cell_length	0..1 String		direct
motility	0..1 String		direct
sporulation	0..1 String		direct
cell_diameter	0..1 String		direct
temperature_range	0..1 String		direct
growth_temperature	0..1 Float		direct
growth_temperature2	0..1 Float		direct
sample_collection_temperature	0..1 Float		direct
sample_collection_temperature2	0..1 Float		direct
color	0..1 Cvcolor	Foreign key to cvcolor	direct
depth	0..1 Float		direct
depth2	0..1 Float		direct
subsurface_depth1	0..1 Float		direct
subsurface_depth2	0..1 Float		direct
altitude	0..1 Float		direct
altitude2	0..1 Float		direct
elevation	0..1 Float		direct
elevation2	0..1 Float		direct
ph1	0..1 Float		direct
ph2	0..1 Float		direct
salinity	0..1 String		direct
pressure	0..1 String		direct
chlorophyll_concentration	0..1 String		direct
nitrate_concentration	0..1 String		direct
oxygen_concentration	0..1 String		direct
salinity_concentration	0..1 String		direct
growth_conditions	0..1 String		direct
tot_org_carbon	0..1 Float		direct
tot_nitrogen	0..1 String		direct
bicarbonate_millimol	0..1 Float		direct
soluble_iron_micromol	0..1 Float		direct
h2s_millimol	0..1 Float		direct
h2s_present	0..1 String		direct
irradiance	0..1 String		direct
methane_conc_millimol	0..1 Float		direct
sample_conductivity	0..1 String		direct
env_broad_scale	0..1 String		direct
env_local_scale	0..1 String		direct
env_medium	0..1 String		direct
host_name	0..1 String		direct
host_taxonomy_id	0..1 Float		direct
host_gender	0..1 String		direct
host_race	0..1 String		direct
host_age	0..1 String		direct
host_health_condition	0..1 String		direct
host_medication	0..1 String		direct
host_body_site	0..1 String		direct
host_body_subsite	0..1 String		direct
host_body_product	0..1 String		direct
host_body_site_id	0..1 Float		direct
host_body_subsite_id	0..1 Float		direct
host_body_product_id	0..1 Float		direct
host_specificity	0..1 String		direct
host_comments	0..1 String		direct
patient_visit_number	0..1 Float		direct
mrn	0..1 String		direct
known_non_hosts	0..1 String		direct
other_hosts	0..1 String		direct
viral_group	0..1 String		direct
viral_subgroup	0..1 String		direct
virus_enrich_appr	0..1 String		direct
propagation	0..1 String		direct
ploidy	0..1 String		direct
pathogenicity	0..1 String		direct
health_disease_stat	0..1 String		direct
encoded_traits	0..1 String		direct
tax_ident	0..1 String		direct
comments	0..1 String		direct
annotator_comments	0..1 String		direct
sample_contact_name	0..1 String		direct
sample_contact_email	0..1 String		direct
sampling_strategy	0..1 String		direct
replicate_number	0..1 Float		direct
symbiotic_relationship	0..1 String		direct
symbiotic_physical_interaction	0..1 String		direct
symbiont_name	0..1 String		direct
symbiont_taxon_id	0..1 Float		direct
commercial	0..1 String		direct
commercial_comments	0..1 String		direct
subsurface_depth	0..1 String		direct
ph	0..1 String		direct
is_virocell	0..1 String		direct
straininfo_group_id	0..1 Float		direct
source	0..1 String		direct
taxonomy_status	0..1 String		direct
legacy_depth_data	0..1 String		direct
latitude_test	0..1 Float		direct
longitude_test	0..1 Float		direct
soil_curr_land_use	0..1 String		direct
soil_curr_vegetation	0..1 String		direct
soil_curr_vegetation_method	0..1 String		direct
soil_prev_land_use	0..1 String		direct
soil_sample_biomass	0..1 Float		direct
soil_sample_volume	0..1 Float		direct
img_breadth_calc	0..1 Float		direct
public_sp_count	0..1 Float		direct
admin_sp_count	0..1 Float		direct
public_ap_count	0..1 Float		direct
admin_ap_count	0..1 Float		direct
gold_class	0..1 String		direct
gold_order	0..1 String		direct
gold_family	0..1 String		direct
submit_organism_name	0..1 String		direct
biosample_id	0..1 Biosample	Foreign key to biosample	direct
exemplar_doi	0..1 String		direct
exemplar_name	0..1 String		direct
taxon_doi	0..1 String		direct
strain_info_id	0..1 Float		direct
biosafety_level	0..1 String		direct
ncbi_biosample_id	0..1 String		direct
longhurst_code	0..1 String		direct
cruise_line_name	0..1 String		direct
proport_ocean	0..1 String		direct
proport_isolation	0..1 String		direct
proport_station	0..1 String		direct
proport_woa_temperature	0..1 Float		direct
proport_woa_salinity	0..1 Float		direct
proport_woa_dissolved_oxygen	0..1 Float		direct
proport_woa_silicate	0..1 Float		direct
proport_woa_phosphate	0..1 Float		direct
proport_woa_nitrate	0..1 Float		direct
its_growth_conditions	0..1 String		direct
project_oid	0..1 Float		direct
sample_oid	0..1 Float		direct
specimen	0..1 String		direct
submit_biosample_name	0..1 String		direct
soil_package_id	0..1 PackageSoil	Foreign key to package_soil	direct
water_package_id	0..1 Float		direct
plant_package_id	0..1 Float		direct
hydrocarbon_fs_package_id	0..1 Float		direct
hydrocarbon_core_package_id	0..1 Float		direct
microbial_mat_package_id	0..1 Float		direct
sediment_package_id	0..1 Float		direct
package_host_associated_id	0..1 Float		direct
package_human_associated_id	0..1 Float		direct
package_wastewater_id	0..1 Float		direct
package_built_environment_id	0..1 Float		direct
sample_volume	0..1 String		direct
sample_biomass	0..1 String		direct
is_draft	0..1 String		direct
is_test	0..1 String		direct

Usages

used by	used in	type	used
AnalysisProject	organism_id	range	OrganismV2
OrganismCellArrangement	organism_id	range	OrganismV2
OrganismMetabolism	organism_id	range	OrganismV2
OrganismV2	master_group_id	range	OrganismV2
PackageSoil	organism_id	range	OrganismV2
Project	organism_id	range	OrganismV2

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/gold

Mappings

Mapping Type	Mapped Value
self	gold:OrganismV2
native	gold:OrganismV2

LinkML Source

Direct

name: organism_v2
from_schema: https://w3id.org/jgi/gold
attributes:
  organism_id:
    name: organism_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_cell_arrangement
    - organism_metabolism
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - dw_sequencing_product
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - excel
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_by:
    name: mod_by
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  organism_name:
    name: organism_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - assembly
    - ncbi_assembly
    - organism_v2
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  subspecies:
    name: subspecies
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  serovar:
    name: serovar
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  culture_collection_id:
    name: culture_collection_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - bacdive
    - organism_v2
    range: string
    required: false
  type_strain:
    name: type_strain
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  gold_phylogeny:
    name: gold_phylogeny
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  ncbi_taxonomy_id:
    name: ncbi_taxonomy_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ncbi_taxonomy_name:
    name: ncbi_taxonomy_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  ncbi_superkingdom:
    name: ncbi_superkingdom
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_kingdom:
    name: ncbi_kingdom
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_phylum:
    name: ncbi_phylum
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_class:
    name: ncbi_class
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_order:
    name: ncbi_order
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_family:
    name: ncbi_family
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_genus:
    name: ncbi_genus
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_species:
    name: ncbi_species
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  genbank_16s_id:
    name: genbank_16s_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  clade:
    name: clade
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  tax_class_method:
    name: tax_class_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  organism_type:
    name: organism_type
    description: Foreign key to cvorganism_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - project
    range: cvorganism_type
    required: false
  cultured:
    name: cultured
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  culture_type:
    name: culture_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  uncultured_type:
    name: uncultured_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  other_names:
    name: other_names
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  genus_synonyms:
    name: genus_synonyms
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  species_synonyms:
    name: species_synonyms
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  ecotype:
    name: ecotype
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  common_name:
    name: common_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  master_group_id:
    name: master_group_id
    description: Foreign key to organism_v2
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: organism_v2
    required: false
  submitter_id:
    name: submitter_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - sra_experiment_v2
    range: float
    required: false
  sample_collection_site:
    name: sample_collection_site
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_isolation_country_id:
    name: sample_isolation_country_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  geographic_location:
    name: geographic_location
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  lat_long_inferred:
    name: lat_long_inferred
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  isolation_publication_id:
    name: isolation_publication_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  isolation_pubmed_id:
    name: isolation_pubmed_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_isolation_comments:
    name: sample_isolation_comments
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_collection_day:
    name: sample_collection_day
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_month:
    name: sample_collection_month
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_year:
    name: sample_collection_year
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_hour:
    name: sample_collection_hour
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_minute:
    name: sample_collection_minute
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ecosystem_path_id:
    name: ecosystem_path_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - sigs_view
    - study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - sigs_view
    - study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  other_ecosystem:
    name: other_ecosystem
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  oxygen_requirement:
    name: oxygen_requirement
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  carbon_source:
    name: carbon_source
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_shape:
    name: cell_shape
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_length:
    name: cell_length
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  motility:
    name: motility
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  sporulation:
    name: sporulation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_diameter:
    name: cell_diameter
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  temperature_range:
    name: temperature_range
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  growth_temperature:
    name: growth_temperature
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  growth_temperature2:
    name: growth_temperature2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_temperature:
    name: sample_collection_temperature
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  sample_collection_temperature2:
    name: sample_collection_temperature2
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  color:
    name: color
    description: Foreign key to cvcolor
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: cvcolor
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  depth2:
    name: depth2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  subsurface_depth1:
    name: subsurface_depth1
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  subsurface_depth2:
    name: subsurface_depth2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  altitude2:
    name: altitude2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  elevation:
    name: elevation
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  elevation2:
    name: elevation2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ph1:
    name: ph1
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ph2:
    name: ph2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  chlorophyll_concentration:
    name: chlorophyll_concentration
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  nitrate_concentration:
    name: nitrate_concentration
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  oxygen_concentration:
    name: oxygen_concentration
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  salinity_concentration:
    name: salinity_concentration
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  growth_conditions:
    name: growth_conditions
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  tot_org_carbon:
    name: tot_org_carbon
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: float
    required: false
  tot_nitrogen:
    name: tot_nitrogen
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: string
    required: false
  bicarbonate_millimol:
    name: bicarbonate_millimol
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  soluble_iron_micromol:
    name: soluble_iron_micromol
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  h2s_millimol:
    name: h2s_millimol
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  h2s_present:
    name: h2s_present
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  irradiance:
    name: irradiance
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  methane_conc_millimol:
    name: methane_conc_millimol
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_conductivity:
    name: sample_conductivity
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_broad_scale:
    name: env_broad_scale
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_local_scale:
    name: env_local_scale
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_medium:
    name: env_medium
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_taxonomy_id:
    name: host_taxonomy_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_race:
    name: host_race
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_age:
    name: host_age
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_health_condition:
    name: host_health_condition
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_medication:
    name: host_medication
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_site:
    name: host_body_site
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_subsite:
    name: host_body_subsite
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_product:
    name: host_body_product
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_site_id:
    name: host_body_site_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_body_subsite_id:
    name: host_body_subsite_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_body_product_id:
    name: host_body_product_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_specificity:
    name: host_specificity
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_comments:
    name: host_comments
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  patient_visit_number:
    name: patient_visit_number
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  known_non_hosts:
    name: known_non_hosts
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  other_hosts:
    name: other_hosts
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  viral_group:
    name: viral_group
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  viral_subgroup:
    name: viral_subgroup
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  virus_enrich_appr:
    name: virus_enrich_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  propagation:
    name: propagation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  ploidy:
    name: ploidy
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  pathogenicity:
    name: pathogenicity
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - dw_samples
    - organism_v2
    range: string
    required: false
  health_disease_stat:
    name: health_disease_stat
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  encoded_traits:
    name: encoded_traits
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  tax_ident:
    name: tax_ident
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - assembly
    - organism_v2
    range: string
    required: false
  annotator_comments:
    name: annotator_comments
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    range: string
    required: false
  sample_contact_name:
    name: sample_contact_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_contact_email:
    name: sample_contact_email
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sampling_strategy:
    name: sampling_strategy
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  replicate_number:
    name: replicate_number
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  symbiotic_relationship:
    name: symbiotic_relationship
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiotic_physical_interaction:
    name: symbiotic_physical_interaction
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiont_name:
    name: symbiont_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiont_taxon_id:
    name: symbiont_taxon_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  commercial:
    name: commercial
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  commercial_comments:
    name: commercial_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  subsurface_depth:
    name: subsurface_depth
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: string
    required: false
  is_virocell:
    name: is_virocell
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  straininfo_group_id:
    name: straininfo_group_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  source:
    name: source
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - ncbi_genbank
    - organism_v2
    range: string
    required: false
  taxonomy_status:
    name: taxonomy_status
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  legacy_depth_data:
    name: legacy_depth_data
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  latitude_test:
    name: latitude_test
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  longitude_test:
    name: longitude_test
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  soil_curr_land_use:
    name: soil_curr_land_use
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_curr_vegetation:
    name: soil_curr_vegetation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_curr_vegetation_method:
    name: soil_curr_vegetation_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_prev_land_use:
    name: soil_prev_land_use
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_sample_biomass:
    name: soil_sample_biomass
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: float
    required: false
  soil_sample_volume:
    name: soil_sample_volume
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    - package_soil
    range: float
    required: false
  img_breadth_calc:
    name: img_breadth_calc
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  public_sp_count:
    name: public_sp_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  admin_sp_count:
    name: admin_sp_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  public_ap_count:
    name: public_ap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  admin_ap_count:
    name: admin_ap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  gold_class:
    name: gold_class
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  gold_order:
    name: gold_order
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  gold_family:
    name: gold_family
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  submit_organism_name:
    name: submit_organism_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  biosample_id:
    name: biosample_id
    description: Foreign key to biosample
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - biosample_disease
    - organism_v2
    - package_soil
    range: biosample
    required: false
  exemplar_doi:
    name: exemplar_doi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  exemplar_name:
    name: exemplar_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  taxon_doi:
    name: taxon_doi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  strain_info_id:
    name: strain_info_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: float
    required: false
  biosafety_level:
    name: biosafety_level
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  ncbi_biosample_id:
    name: ncbi_biosample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - organism_v2
    range: string
    required: false
  longhurst_code:
    name: longhurst_code
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  cruise_line_name:
    name: cruise_line_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_ocean:
    name: proport_ocean
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_isolation:
    name: proport_isolation
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_station:
    name: proport_station
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_woa_temperature:
    name: proport_woa_temperature
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_salinity:
    name: proport_woa_salinity
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_dissolved_oxygen:
    name: proport_woa_dissolved_oxygen
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_silicate:
    name: proport_woa_silicate
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_phosphate:
    name: proport_woa_phosphate
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_nitrate:
    name: proport_woa_nitrate
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  its_growth_conditions:
    name: its_growth_conditions
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  specimen:
    name: specimen
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    range: string
    required: false
  submit_biosample_name:
    name: submit_biosample_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  soil_package_id:
    name: soil_package_id
    description: Foreign key to package_soil
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: package_soil
    required: false
  water_package_id:
    name: water_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  plant_package_id:
    name: plant_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  hydrocarbon_fs_package_id:
    name: hydrocarbon_fs_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  hydrocarbon_core_package_id:
    name: hydrocarbon_core_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  microbial_mat_package_id:
    name: microbial_mat_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sediment_package_id:
    name: sediment_package_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_host_associated_id:
    name: package_host_associated_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_human_associated_id:
    name: package_human_associated_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_wastewater_id:
    name: package_wastewater_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_built_environment_id:
    name: package_built_environment_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_volume:
    name: sample_volume
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_biomass:
    name: sample_biomass
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  is_draft:
    name: is_draft
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_test:
    name: is_test
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false

Induced

name: organism_v2
from_schema: https://w3id.org/jgi/gold
attributes:
  organism_id:
    name: organism_id
    from_schema: https://w3id.org/jgi/gold
    alias: organism_id
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_cell_arrangement
    - organism_metabolism
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/gold
    alias: active
    owner: organism_v2
    domain_of:
    - biosample
    - dw_sequencing_product
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/gold
    alias: is_public
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/gold
    alias: add_date
    owner: organism_v2
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - excel
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/gold
    alias: mod_date
    owner: organism_v2
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_by:
    name: mod_by
    from_schema: https://w3id.org/jgi/gold
    alias: mod_by
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/gold
    alias: gold_id
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  organism_name:
    name: organism_name
    from_schema: https://w3id.org/jgi/gold
    alias: organism_name
    owner: organism_v2
    domain_of:
    - assembly
    - ncbi_assembly
    - organism_v2
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/gold
    alias: genus
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/gold
    alias: species
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  subspecies:
    name: subspecies
    from_schema: https://w3id.org/jgi/gold
    alias: subspecies
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/gold
    alias: strain
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  serovar:
    name: serovar
    from_schema: https://w3id.org/jgi/gold
    alias: serovar
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  culture_collection_id:
    name: culture_collection_id
    from_schema: https://w3id.org/jgi/gold
    alias: culture_collection_id
    owner: organism_v2
    domain_of:
    - bacdive
    - organism_v2
    range: string
    required: false
  type_strain:
    name: type_strain
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: type_strain
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/gold
    alias: domain
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    - sigs_view
    range: string
    required: false
  gold_phylogeny:
    name: gold_phylogeny
    from_schema: https://w3id.org/jgi/gold
    alias: gold_phylogeny
    owner: organism_v2
    domain_of:
    - analysis_project
    - organism_v2
    range: string
    required: false
  ncbi_taxonomy_id:
    name: ncbi_taxonomy_id
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_taxonomy_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ncbi_taxonomy_name:
    name: ncbi_taxonomy_name
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_taxonomy_name
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  ncbi_superkingdom:
    name: ncbi_superkingdom
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_superkingdom
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_kingdom:
    name: ncbi_kingdom
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_kingdom
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_phylum:
    name: ncbi_phylum
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_phylum
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_class:
    name: ncbi_class
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_class
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_order:
    name: ncbi_order
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_order
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_family:
    name: ncbi_family
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_family
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    - sigs_view
    range: string
    required: false
  ncbi_genus:
    name: ncbi_genus
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_genus
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  ncbi_species:
    name: ncbi_species
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_species
    owner: organism_v2
    domain_of:
    - analysis_project
    - ncbi_taxonomy
    - organism_v2
    range: string
    required: false
  genbank_16s_id:
    name: genbank_16s_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: genbank_16s_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  clade:
    name: clade
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: clade
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  tax_class_method:
    name: tax_class_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: tax_class_method
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  organism_type:
    name: organism_type
    description: Foreign key to cvorganism_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: organism_type
    owner: organism_v2
    domain_of:
    - organism_v2
    - project
    range: cvorganism_type
    required: false
  cultured:
    name: cultured
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: cultured
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  culture_type:
    name: culture_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: culture_type
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  uncultured_type:
    name: uncultured_type
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: uncultured_type
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  other_names:
    name: other_names
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: other_names
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  genus_synonyms:
    name: genus_synonyms
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: genus_synonyms
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  species_synonyms:
    name: species_synonyms
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: species_synonyms
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  ecotype:
    name: ecotype
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ecotype
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  common_name:
    name: common_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: common_name
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  master_group_id:
    name: master_group_id
    description: Foreign key to organism_v2
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: master_group_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: organism_v2
    required: false
  submitter_id:
    name: submitter_id
    from_schema: https://w3id.org/jgi/gold
    alias: submitter_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    - sra_experiment_v2
    range: float
    required: false
  sample_collection_site:
    name: sample_collection_site
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_site
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_isolation_country_id:
    name: sample_isolation_country_id
    from_schema: https://w3id.org/jgi/gold
    alias: sample_isolation_country_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  geographic_location:
    name: geographic_location
    from_schema: https://w3id.org/jgi/gold
    alias: geographic_location
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/gold
    alias: latitude
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/gold
    alias: longitude
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  lat_long_inferred:
    name: lat_long_inferred
    from_schema: https://w3id.org/jgi/gold
    alias: lat_long_inferred
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  isolation_publication_id:
    name: isolation_publication_id
    from_schema: https://w3id.org/jgi/gold
    alias: isolation_publication_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  isolation_pubmed_id:
    name: isolation_pubmed_id
    from_schema: https://w3id.org/jgi/gold
    alias: isolation_pubmed_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_isolation_comments:
    name: sample_isolation_comments
    from_schema: https://w3id.org/jgi/gold
    alias: sample_isolation_comments
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_collection_day:
    name: sample_collection_day
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_day
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_month:
    name: sample_collection_month
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_month
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_year:
    name: sample_collection_year
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_year
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_hour:
    name: sample_collection_hour
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_hour
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_minute:
    name: sample_collection_minute
    from_schema: https://w3id.org/jgi/gold
    alias: sample_collection_minute
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ecosystem_path_id:
    name: ecosystem_path_id
    from_schema: https://w3id.org/jgi/gold
    alias: ecosystem_path_id
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/gold
    alias: ecosystem
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - sigs_view
    - study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/gold
    alias: ecosystem_category
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - sigs_view
    - study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/gold
    alias: ecosystem_type
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/gold
    alias: ecosystem_subtype
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/gold
    alias: specific_ecosystem
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - study
    range: string
    required: false
  other_ecosystem:
    name: other_ecosystem
    from_schema: https://w3id.org/jgi/gold
    alias: other_ecosystem
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gram_stain
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  oxygen_requirement:
    name: oxygen_requirement
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: oxygen_requirement
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  carbon_source:
    name: carbon_source
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: carbon_source
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_shape:
    name: cell_shape
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: cell_shape
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_length:
    name: cell_length
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: cell_length
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  motility:
    name: motility
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: motility
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  sporulation:
    name: sporulation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sporulation
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  cell_diameter:
    name: cell_diameter
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: cell_diameter
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  temperature_range:
    name: temperature_range
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: temperature_range
    owner: organism_v2
    domain_of:
    - organism_v2
    - sigs_view
    range: string
    required: false
  growth_temperature:
    name: growth_temperature
    from_schema: https://w3id.org/jgi/gold
    alias: growth_temperature
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  growth_temperature2:
    name: growth_temperature2
    from_schema: https://w3id.org/jgi/gold
    alias: growth_temperature2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_collection_temperature:
    name: sample_collection_temperature
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sample_collection_temperature
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  sample_collection_temperature2:
    name: sample_collection_temperature2
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sample_collection_temperature2
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  color:
    name: color
    description: Foreign key to cvcolor
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: color
    owner: organism_v2
    domain_of:
    - organism_v2
    range: cvcolor
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/gold
    alias: depth
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  depth2:
    name: depth2
    from_schema: https://w3id.org/jgi/gold
    alias: depth2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  subsurface_depth1:
    name: subsurface_depth1
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: subsurface_depth1
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  subsurface_depth2:
    name: subsurface_depth2
    from_schema: https://w3id.org/jgi/gold
    alias: subsurface_depth2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/gold
    alias: altitude
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: float
    required: false
  altitude2:
    name: altitude2
    from_schema: https://w3id.org/jgi/gold
    alias: altitude2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  elevation:
    name: elevation
    from_schema: https://w3id.org/jgi/gold
    alias: elevation
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  elevation2:
    name: elevation2
    from_schema: https://w3id.org/jgi/gold
    alias: elevation2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ph1:
    name: ph1
    from_schema: https://w3id.org/jgi/gold
    alias: ph1
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  ph2:
    name: ph2
    from_schema: https://w3id.org/jgi/gold
    alias: ph2
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/gold
    alias: salinity
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/gold
    alias: pressure
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  chlorophyll_concentration:
    name: chlorophyll_concentration
    from_schema: https://w3id.org/jgi/gold
    alias: chlorophyll_concentration
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  nitrate_concentration:
    name: nitrate_concentration
    from_schema: https://w3id.org/jgi/gold
    alias: nitrate_concentration
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  oxygen_concentration:
    name: oxygen_concentration
    from_schema: https://w3id.org/jgi/gold
    alias: oxygen_concentration
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  salinity_concentration:
    name: salinity_concentration
    from_schema: https://w3id.org/jgi/gold
    alias: salinity_concentration
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  growth_conditions:
    name: growth_conditions
    from_schema: https://w3id.org/jgi/gold
    alias: growth_conditions
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  tot_org_carbon:
    name: tot_org_carbon
    from_schema: https://w3id.org/jgi/gold
    alias: tot_org_carbon
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: float
    required: false
  tot_nitrogen:
    name: tot_nitrogen
    from_schema: https://w3id.org/jgi/gold
    alias: tot_nitrogen
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: string
    required: false
  bicarbonate_millimol:
    name: bicarbonate_millimol
    from_schema: https://w3id.org/jgi/gold
    alias: bicarbonate_millimol
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  soluble_iron_micromol:
    name: soluble_iron_micromol
    from_schema: https://w3id.org/jgi/gold
    alias: soluble_iron_micromol
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  h2s_millimol:
    name: h2s_millimol
    from_schema: https://w3id.org/jgi/gold
    alias: h2s_millimol
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  h2s_present:
    name: h2s_present
    from_schema: https://w3id.org/jgi/gold
    alias: h2s_present
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  irradiance:
    name: irradiance
    from_schema: https://w3id.org/jgi/gold
    alias: irradiance
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  methane_conc_millimol:
    name: methane_conc_millimol
    from_schema: https://w3id.org/jgi/gold
    alias: methane_conc_millimol
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_conductivity:
    name: sample_conductivity
    from_schema: https://w3id.org/jgi/gold
    alias: sample_conductivity
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_broad_scale:
    name: env_broad_scale
    from_schema: https://w3id.org/jgi/gold
    alias: env_broad_scale
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_local_scale:
    name: env_local_scale
    from_schema: https://w3id.org/jgi/gold
    alias: env_local_scale
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  env_medium:
    name: env_medium
    from_schema: https://w3id.org/jgi/gold
    alias: env_medium
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/gold
    alias: host_name
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_taxonomy_id:
    name: host_taxonomy_id
    from_schema: https://w3id.org/jgi/gold
    alias: host_taxonomy_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/gold
    alias: host_gender
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_race:
    name: host_race
    from_schema: https://w3id.org/jgi/gold
    alias: host_race
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_age:
    name: host_age
    from_schema: https://w3id.org/jgi/gold
    alias: host_age
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_health_condition:
    name: host_health_condition
    from_schema: https://w3id.org/jgi/gold
    alias: host_health_condition
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_medication:
    name: host_medication
    from_schema: https://w3id.org/jgi/gold
    alias: host_medication
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_site:
    name: host_body_site
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_site
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_subsite:
    name: host_body_subsite
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_subsite
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_product:
    name: host_body_product
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_product
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_body_site_id:
    name: host_body_site_id
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_site_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_body_subsite_id:
    name: host_body_subsite_id
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_subsite_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_body_product_id:
    name: host_body_product_id
    from_schema: https://w3id.org/jgi/gold
    alias: host_body_product_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  host_specificity:
    name: host_specificity
    from_schema: https://w3id.org/jgi/gold
    alias: host_specificity
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  host_comments:
    name: host_comments
    from_schema: https://w3id.org/jgi/gold
    alias: host_comments
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  patient_visit_number:
    name: patient_visit_number
    from_schema: https://w3id.org/jgi/gold
    alias: patient_visit_number
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/gold
    alias: mrn
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  known_non_hosts:
    name: known_non_hosts
    from_schema: https://w3id.org/jgi/gold
    alias: known_non_hosts
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  other_hosts:
    name: other_hosts
    from_schema: https://w3id.org/jgi/gold
    alias: other_hosts
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  viral_group:
    name: viral_group
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: viral_group
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  viral_subgroup:
    name: viral_subgroup
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: viral_subgroup
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  virus_enrich_appr:
    name: virus_enrich_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: virus_enrich_appr
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  propagation:
    name: propagation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: propagation
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  ploidy:
    name: ploidy
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ploidy
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  pathogenicity:
    name: pathogenicity
    from_schema: https://w3id.org/jgi/gold
    alias: pathogenicity
    owner: organism_v2
    domain_of:
    - dw_samples
    - organism_v2
    range: string
    required: false
  health_disease_stat:
    name: health_disease_stat
    from_schema: https://w3id.org/jgi/gold
    alias: health_disease_stat
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  encoded_traits:
    name: encoded_traits
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: encoded_traits
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  tax_ident:
    name: tax_ident
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: tax_ident
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/gold
    alias: comments
    owner: organism_v2
    domain_of:
    - analysis_project
    - assembly
    - organism_v2
    range: string
    required: false
  annotator_comments:
    name: annotator_comments
    from_schema: https://w3id.org/jgi/gold
    alias: annotator_comments
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    range: string
    required: false
  sample_contact_name:
    name: sample_contact_name
    from_schema: https://w3id.org/jgi/gold
    alias: sample_contact_name
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_contact_email:
    name: sample_contact_email
    from_schema: https://w3id.org/jgi/gold
    alias: sample_contact_email
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sampling_strategy:
    name: sampling_strategy
    from_schema: https://w3id.org/jgi/gold
    alias: sampling_strategy
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  replicate_number:
    name: replicate_number
    from_schema: https://w3id.org/jgi/gold
    alias: replicate_number
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  symbiotic_relationship:
    name: symbiotic_relationship
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: symbiotic_relationship
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiotic_physical_interaction:
    name: symbiotic_physical_interaction
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: symbiotic_physical_interaction
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiont_name:
    name: symbiont_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: symbiont_name
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  symbiont_taxon_id:
    name: symbiont_taxon_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: symbiont_taxon_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  commercial:
    name: commercial
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: commercial
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  commercial_comments:
    name: commercial_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: commercial_comments
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  subsurface_depth:
    name: subsurface_depth
    from_schema: https://w3id.org/jgi/gold
    alias: subsurface_depth
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/gold
    alias: ph
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - sigs_view
    range: string
    required: false
  is_virocell:
    name: is_virocell
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: is_virocell
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  straininfo_group_id:
    name: straininfo_group_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: straininfo_group_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  source:
    name: source
    from_schema: https://w3id.org/jgi/gold
    alias: source
    owner: organism_v2
    domain_of:
    - ncbi_genbank
    - organism_v2
    range: string
    required: false
  taxonomy_status:
    name: taxonomy_status
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: taxonomy_status
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  legacy_depth_data:
    name: legacy_depth_data
    from_schema: https://w3id.org/jgi/gold
    alias: legacy_depth_data
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  latitude_test:
    name: latitude_test
    from_schema: https://w3id.org/jgi/gold
    alias: latitude_test
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  longitude_test:
    name: longitude_test
    from_schema: https://w3id.org/jgi/gold
    alias: longitude_test
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  soil_curr_land_use:
    name: soil_curr_land_use
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_curr_land_use
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_curr_vegetation:
    name: soil_curr_vegetation
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_curr_vegetation
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_curr_vegetation_method:
    name: soil_curr_vegetation_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_curr_vegetation_method
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_prev_land_use:
    name: soil_prev_land_use
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_prev_land_use
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: string
    required: false
  soil_sample_biomass:
    name: soil_sample_biomass
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_sample_biomass
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: float
    required: false
  soil_sample_volume:
    name: soil_sample_volume
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: soil_sample_volume
    owner: organism_v2
    domain_of:
    - organism_v2
    - package_soil
    range: float
    required: false
  img_breadth_calc:
    name: img_breadth_calc
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: img_breadth_calc
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  public_sp_count:
    name: public_sp_count
    from_schema: https://w3id.org/jgi/gold
    alias: public_sp_count
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  admin_sp_count:
    name: admin_sp_count
    from_schema: https://w3id.org/jgi/gold
    alias: admin_sp_count
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - study
    range: float
    required: false
  public_ap_count:
    name: public_ap_count
    from_schema: https://w3id.org/jgi/gold
    alias: public_ap_count
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  admin_ap_count:
    name: admin_ap_count
    from_schema: https://w3id.org/jgi/gold
    alias: admin_ap_count
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  gold_class:
    name: gold_class
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gold_class
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  gold_order:
    name: gold_order
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gold_order
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  gold_family:
    name: gold_family
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gold_family
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  submit_organism_name:
    name: submit_organism_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: submit_organism_name
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  biosample_id:
    name: biosample_id
    description: Foreign key to biosample
    from_schema: https://w3id.org/jgi/gold
    alias: biosample_id
    owner: organism_v2
    domain_of:
    - biosample
    - biosample_disease
    - organism_v2
    - package_soil
    range: biosample
    required: false
  exemplar_doi:
    name: exemplar_doi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: exemplar_doi
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  exemplar_name:
    name: exemplar_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: exemplar_name
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  taxon_doi:
    name: taxon_doi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: taxon_doi
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  strain_info_id:
    name: strain_info_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: strain_info_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: float
    required: false
  biosafety_level:
    name: biosafety_level
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: biosafety_level
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  ncbi_biosample_id:
    name: ncbi_biosample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ncbi_biosample_id
    owner: organism_v2
    domain_of:
    - organism_v2
    range: string
    required: false
  longhurst_code:
    name: longhurst_code
    from_schema: https://w3id.org/jgi/gold
    alias: longhurst_code
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  cruise_line_name:
    name: cruise_line_name
    from_schema: https://w3id.org/jgi/gold
    alias: cruise_line_name
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_ocean:
    name: proport_ocean
    from_schema: https://w3id.org/jgi/gold
    alias: proport_ocean
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_isolation:
    name: proport_isolation
    from_schema: https://w3id.org/jgi/gold
    alias: proport_isolation
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_station:
    name: proport_station
    from_schema: https://w3id.org/jgi/gold
    alias: proport_station
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  proport_woa_temperature:
    name: proport_woa_temperature
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_temperature
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_salinity:
    name: proport_woa_salinity
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_salinity
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_dissolved_oxygen:
    name: proport_woa_dissolved_oxygen
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_dissolved_oxygen
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_silicate:
    name: proport_woa_silicate
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_silicate
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_phosphate:
    name: proport_woa_phosphate
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_phosphate
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  proport_woa_nitrate:
    name: proport_woa_nitrate
    from_schema: https://w3id.org/jgi/gold
    alias: proport_woa_nitrate
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  its_growth_conditions:
    name: its_growth_conditions
    from_schema: https://w3id.org/jgi/gold
    alias: its_growth_conditions
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/gold
    alias: project_oid
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/gold
    alias: sample_oid
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  specimen:
    name: specimen
    from_schema: https://w3id.org/jgi/gold
    alias: specimen
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    range: string
    required: false
  submit_biosample_name:
    name: submit_biosample_name
    from_schema: https://w3id.org/jgi/gold
    alias: submit_biosample_name
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  soil_package_id:
    name: soil_package_id
    description: Foreign key to package_soil
    from_schema: https://w3id.org/jgi/gold
    alias: soil_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - package_soil
    range: package_soil
    required: false
  water_package_id:
    name: water_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: water_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  plant_package_id:
    name: plant_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: plant_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  hydrocarbon_fs_package_id:
    name: hydrocarbon_fs_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: hydrocarbon_fs_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  hydrocarbon_core_package_id:
    name: hydrocarbon_core_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: hydrocarbon_core_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  microbial_mat_package_id:
    name: microbial_mat_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: microbial_mat_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sediment_package_id:
    name: sediment_package_id
    from_schema: https://w3id.org/jgi/gold
    alias: sediment_package_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_host_associated_id:
    name: package_host_associated_id
    from_schema: https://w3id.org/jgi/gold
    alias: package_host_associated_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_human_associated_id:
    name: package_human_associated_id
    from_schema: https://w3id.org/jgi/gold
    alias: package_human_associated_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_wastewater_id:
    name: package_wastewater_id
    from_schema: https://w3id.org/jgi/gold
    alias: package_wastewater_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  package_built_environment_id:
    name: package_built_environment_id
    from_schema: https://w3id.org/jgi/gold
    alias: package_built_environment_id
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: float
    required: false
  sample_volume:
    name: sample_volume
    from_schema: https://w3id.org/jgi/gold
    alias: sample_volume
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  sample_biomass:
    name: sample_biomass
    from_schema: https://w3id.org/jgi/gold
    alias: sample_biomass
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    range: string
    required: false
  is_draft:
    name: is_draft
    from_schema: https://w3id.org/jgi/gold
    alias: is_draft
    owner: organism_v2
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_test:
    name: is_test
    from_schema: https://w3id.org/jgi/gold
    alias: is_test
    owner: organism_v2
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false