Class: Project

URI: gold:Project

classDiagram class Project click Project href "../Project/" Project : active Project : adapters Project : add_date Project : admin_ap_count Project : admin_dap_count Project : annotator_comments Project : assembly_accession Project : chromosome_count Project : completion_date Project : contam_screen_input Project : contig_count Project : description Project : est_count Project : est_size Project : experimental_conditions Project : finishing_goal_id Project : funding_program Project : funding_year Project : gc_percent Project : gold_id Project : gpts_disambiguator Project : gpts_proposal_id Project : gpts_sample_id Project : is_approved Project : is_draft Project : is_jgi Project : is_locked Project : is_public Project : is_single_cell_material Project : is_test Project : isolation_publication_id Project : its_data_utilization_status Project : its_project_name Project : its_proposal_id Project : its_sample_group_name Project : its_sample_id Project : its_sample_name Project : its_sequencing_product_name Project : its_source_sample_pid Project : its_spid Project : legacy_gold_id Project : library_layout Project : library_method Project : library_screen Project : low_quality_genome Project : master_study_id Project --> "0..1" Study : master_study_id click Study href "../Study/" Project : mod_by Project : mod_date Project : multiplex_identifiers Project : ncbi_bioproject_accession Project : ncbi_bioproject_id Project : ncbi_biosample_accession Project : ncbi_locus_tag Project : ncbi_project_name Project : ncbi_sra_id Project : nucl_acid_amp_lit Project : nucl_acid_ext_lit Project : nucleic_acid Project : nucleic_acid_id Project : old_legacy_gold_id Project : organism_id Project --> "0..1" OrganismV2 : organism_id click OrganismV2 href "../OrganismV2/" Project : organism_type Project : other_project_names Project : pcr_cond Project : pcr_primers Project : pi_id Project : plasmid_count Project : pmo_project_id Project : project_comments Project : project_id Project : project_manager_id Project : project_name Project : project_oid Project : project_status Project : project_subtype Project : public_ap_count Project : public_dap_count Project : read_count Project : read_size Project : sample_group_name Project : sample_oid Project : scaffold_count Project : sequencing_comments Project : sequencing_quality_id Project : sequencing_status_id Project : sequencing_strategy Project : sequencing_strategy_full Project : single_cell_lysis_appr Project : single_cell_lysis_prot Project : sort_tech Project : specimen_id Project : sra_srs_accession Project : sra_srx_accession Project : submitter_id Project : target_gene Project : target_subfragment Project : vector Project : wga_amp_appr Project : wga_amp_kit

Slots

Name	Cardinality and Range	Description	Inheritance
project_id	0..1 Float		direct
active	0..1 String		direct
is_public	0..1 String		direct
add_date	0..1 Datetime		direct
mod_date	0..1 Datetime		direct
mod_by	0..1 Float		direct
its_proposal_id	0..1 Float		direct
pmo_project_id	0..1 Float		direct
its_spid	0..1 Float		direct
its_sample_id	0..1 Float		direct
gold_id	0..1 String		direct
project_name	0..1 String		direct
its_project_name	0..1 String		direct
its_sample_name	0..1 String		direct
its_sample_group_name	0..1 String		direct
ncbi_bioproject_id	0..1 Float		direct
ncbi_bioproject_accession	0..1 String		direct
ncbi_biosample_accession	0..1 String		direct
ncbi_project_name	0..1 String		direct
its_sequencing_product_name	0..1 String		direct
sequencing_strategy	0..1 String		direct
sequencing_strategy_full	0..1 String		direct
project_status	0..1 String		direct
master_study_id	0..1 Study	Foreign key to study	direct
organism_id	0..1 OrganismV2	Foreign key to organism_v2	direct
pi_id	0..1 Float		direct
project_manager_id	0..1 Float		direct
is_single_cell_material	0..1 String		direct
other_project_names	0..1 String		direct
description	0..1 String		direct
specimen_id	0..1 Float		direct
nucleic_acid	0..1 String		direct
ncbi_sra_id	0..1 String		direct
ncbi_locus_tag	0..1 String		direct
organism_type	0..1 String		direct
sequencing_status_id	0..1 Float		direct
sequencing_quality_id	0..1 Float		direct
low_quality_genome	0..1 String		direct
sequencing_comments	0..1 String		direct
chromosome_count	0..1 Float		direct
plasmid_count	0..1 Float		direct
scaffold_count	0..1 Float		direct
est_count	0..1 Float		direct
submitter_id	0..1 Float		direct
project_comments	0..1 String		direct
annotator_comments	0..1 String		direct
gpts_proposal_id	0..1 Float		direct
gpts_sample_id	0..1 Float		direct
gpts_disambiguator	0..1 String		direct
library_method	0..1 String		direct
read_count	0..1 String		direct
vector	0..1 String		direct
read_size	0..1 String		direct
assembly_accession	0..1 String		direct
nucleic_acid_id	0..1 Float		direct
gc_percent	0..1 Float		direct
contig_count	0..1 Float		direct
est_size	0..1 Float		direct
completion_date	0..1 Datetime		direct
finishing_goal_id	0..1 Float		direct
public_ap_count	0..1 Float		direct
admin_ap_count	0..1 Float		direct
public_dap_count	0..1 Float		direct
admin_dap_count	0..1 Float		direct
sra_srs_accession	0..1 String		direct
sra_srx_accession	0..1 String		direct
funding_program	0..1 String		direct
funding_year	0..1 Float		direct
experimental_conditions	0..1 String		direct
sample_group_name	0..1 String		direct
project_subtype	0..1 String		direct
single_cell_lysis_prot	0..1 String		direct
wga_amp_appr	0..1 String		direct
sort_tech	0..1 String		direct
single_cell_lysis_appr	0..1 String		direct
library_layout	0..1 String		direct
contam_screen_input	0..1 String		direct
wga_amp_kit	0..1 String		direct
nucl_acid_ext_lit	0..1 String		direct
nucl_acid_amp_lit	0..1 String		direct
library_screen	0..1 String		direct
pcr_primers	0..1 String		direct
multiplex_identifiers	0..1 String		direct
adapters	0..1 String		direct
pcr_cond	0..1 String		direct
target_gene	0..1 String		direct
target_subfragment	0..1 String		direct
its_data_utilization_status	0..1 String		direct
its_source_sample_pid	0..1 String		direct
is_jgi	0..1 String		direct
is_draft	0..1 String		direct
is_test	0..1 String		direct
is_approved	0..1 String		direct
is_locked	0..1 String		direct
isolation_publication_id	0..1 Float		direct
legacy_gold_id	0..1 String		direct
old_legacy_gold_id	0..1 String		direct
project_oid	0..1 Float		direct
sample_oid	0..1 Float		direct

Usages

used by	used in	type	used
ProjectAnalysisProject	project_id	range	Project
SraExperimentV2	project_id	range	Project

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/gold

Mappings

Mapping Type	Mapped Value
self	gold:Project
native	gold:Project

LinkML Source

Direct

name: project
from_schema: https://w3id.org/jgi/gold
attributes:
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - project_analysis_project
    - sra_experiment_v2
    range: float
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - dw_sequencing_product
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - excel
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_by:
    name: mod_by
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - study
    range: float
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  its_sample_id:
    name: its_sample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  its_project_name:
    name: its_project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  its_sample_name:
    name: its_sample_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  its_sample_group_name:
    name: its_sample_group_name
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - project
    range: string
    required: false
  ncbi_bioproject_id:
    name: ncbi_bioproject_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  ncbi_bioproject_accession:
    name: ncbi_bioproject_accession
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    - sigs_view
    range: string
    required: false
  ncbi_biosample_accession:
    name: ncbi_biosample_accession
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: string
    required: false
  ncbi_project_name:
    name: ncbi_project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  its_sequencing_product_name:
    name: its_sequencing_product_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sequencing_strategy_full:
    name: sequencing_strategy_full
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  master_study_id:
    name: master_study_id
    description: Foreign key to study
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: study
    required: false
  organism_id:
    name: organism_id
    description: Foreign key to organism_v2
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - organism_cell_arrangement
    - organism_metabolism
    - organism_v2
    - package_soil
    - project
    range: organism_v2
    required: false
  pi_id:
    name: pi_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  project_manager_id:
    name: project_manager_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  is_single_cell_material:
    name: is_single_cell_material
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  other_project_names:
    name: other_project_names
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - dw_sequencing_product
    - ncbi_raw_sra_run
    - project
    - sra_experiment_v2
    - study
    range: string
    required: false
  specimen_id:
    name: specimen_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  nucleic_acid:
    name: nucleic_acid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  ncbi_sra_id:
    name: ncbi_sra_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  ncbi_locus_tag:
    name: ncbi_locus_tag
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  organism_type:
    name: organism_type
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - organism_v2
    - project
    range: string
    required: false
  sequencing_status_id:
    name: sequencing_status_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  sequencing_quality_id:
    name: sequencing_quality_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  low_quality_genome:
    name: low_quality_genome
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sequencing_comments:
    name: sequencing_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  chromosome_count:
    name: chromosome_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  plasmid_count:
    name: plasmid_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  scaffold_count:
    name: scaffold_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_assembly
    - project
    range: float
    required: false
  est_count:
    name: est_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  submitter_id:
    name: submitter_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - sra_experiment_v2
    range: float
    required: false
  project_comments:
    name: project_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  annotator_comments:
    name: annotator_comments
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    range: string
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - study
    range: float
    required: false
  gpts_sample_id:
    name: gpts_sample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  gpts_disambiguator:
    name: gpts_disambiguator
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  library_method:
    name: library_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  read_count:
    name: read_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  vector:
    name: vector
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  read_size:
    name: read_size
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  assembly_accession:
    name: assembly_accession
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - ncbi_assembly
    - project
    range: string
    required: false
  nucleic_acid_id:
    name: nucleic_acid_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  gc_percent:
    name: gc_percent
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - ncbi_assembly
    - project
    range: float
    required: false
  contig_count:
    name: contig_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - ncbi_assembly
    - project
    range: float
    required: false
  est_size:
    name: est_size
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  completion_date:
    name: completion_date
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: datetime
    required: false
  finishing_goal_id:
    name: finishing_goal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  public_ap_count:
    name: public_ap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  admin_ap_count:
    name: admin_ap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  public_dap_count:
    name: public_dap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - project
    - study
    range: float
    required: false
  admin_dap_count:
    name: admin_dap_count
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - project
    - study
    range: float
    required: false
  sra_srs_accession:
    name: sra_srs_accession
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sra_srx_accession:
    name: sra_srx_accession
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - sigs_view
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: float
    required: false
  experimental_conditions:
    name: experimental_conditions
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sample_group_name:
    name: sample_group_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  project_subtype:
    name: project_subtype
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  single_cell_lysis_prot:
    name: single_cell_lysis_prot
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  wga_amp_appr:
    name: wga_amp_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  sort_tech:
    name: sort_tech
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  single_cell_lysis_appr:
    name: single_cell_lysis_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  library_layout:
    name: library_layout
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - sra_experiment_v2
    range: string
    required: false
  contam_screen_input:
    name: contam_screen_input
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  wga_amp_kit:
    name: wga_amp_kit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  nucl_acid_ext_lit:
    name: nucl_acid_ext_lit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  nucl_acid_amp_lit:
    name: nucl_acid_amp_lit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  library_screen:
    name: library_screen
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  pcr_primers:
    name: pcr_primers
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  multiplex_identifiers:
    name: multiplex_identifiers
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  adapters:
    name: adapters
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  pcr_cond:
    name: pcr_cond
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  target_gene:
    name: target_gene
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  target_subfragment:
    name: target_subfragment
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - project
    range: string
    required: false
  its_source_sample_pid:
    name: its_source_sample_pid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  is_jgi:
    name: is_jgi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  is_draft:
    name: is_draft
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_test:
    name: is_test
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  is_approved:
    name: is_approved
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  is_locked:
    name: is_locked
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  isolation_publication_id:
    name: isolation_publication_id
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  legacy_gold_id:
    name: legacy_gold_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    - study
    range: string
    required: false
  old_legacy_gold_id:
    name: old_legacy_gold_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    domain_of:
    - project
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/gold
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false

Induced

name: project
from_schema: https://w3id.org/jgi/gold
attributes:
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_id
    owner: project
    domain_of:
    - project
    - project_analysis_project
    - sra_experiment_v2
    range: float
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/gold
    alias: active
    owner: project
    domain_of:
    - biosample
    - dw_sequencing_product
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/gold
    alias: is_public
    owner: project
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/gold
    alias: add_date
    owner: project
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - excel
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/gold
    alias: mod_date
    owner: project
    domain_of:
    - analysis_project
    - api_user
    - bacdive
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - package_soil
    - project
    - study
    range: datetime
    required: false
  mod_by:
    name: mod_by
    from_schema: https://w3id.org/jgi/gold
    alias: mod_by
    owner: project
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - package_soil
    - project
    range: float
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_proposal_id
    owner: project
    domain_of:
    - project
    - study
    range: float
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: pmo_project_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_spid
    owner: project
    domain_of:
    - project
    range: float
    required: false
  its_sample_id:
    name: its_sample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_sample_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/gold
    alias: gold_id
    owner: project
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  its_project_name:
    name: its_project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_project_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  its_sample_name:
    name: its_sample_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_sample_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  its_sample_group_name:
    name: its_sample_group_name
    from_schema: https://w3id.org/jgi/gold
    alias: its_sample_group_name
    owner: project
    domain_of:
    - biosample
    - project
    range: string
    required: false
  ncbi_bioproject_id:
    name: ncbi_bioproject_id
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_bioproject_id
    owner: project
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  ncbi_bioproject_accession:
    name: ncbi_bioproject_accession
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_bioproject_accession
    owner: project
    domain_of:
    - analysis_project
    - project
    - sigs_view
    range: string
    required: false
  ncbi_biosample_accession:
    name: ncbi_biosample_accession
    from_schema: https://w3id.org/jgi/gold
    alias: ncbi_biosample_accession
    owner: project
    domain_of:
    - analysis_project
    - project
    range: string
    required: false
  ncbi_project_name:
    name: ncbi_project_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ncbi_project_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  its_sequencing_product_name:
    name: its_sequencing_product_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_sequencing_product_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sequencing_strategy
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sequencing_strategy_full:
    name: sequencing_strategy_full
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sequencing_strategy_full
    owner: project
    domain_of:
    - project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_status
    owner: project
    domain_of:
    - project
    range: string
    required: false
  master_study_id:
    name: master_study_id
    description: Foreign key to study
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: master_study_id
    owner: project
    domain_of:
    - project
    range: study
    required: false
  organism_id:
    name: organism_id
    description: Foreign key to organism_v2
    from_schema: https://w3id.org/jgi/gold
    alias: organism_id
    owner: project
    domain_of:
    - analysis_project
    - organism_cell_arrangement
    - organism_metabolism
    - organism_v2
    - package_soil
    - project
    range: organism_v2
    required: false
  pi_id:
    name: pi_id
    from_schema: https://w3id.org/jgi/gold
    alias: pi_id
    owner: project
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  project_manager_id:
    name: project_manager_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_manager_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  is_single_cell_material:
    name: is_single_cell_material
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: is_single_cell_material
    owner: project
    domain_of:
    - project
    range: string
    required: false
  other_project_names:
    name: other_project_names
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: other_project_names
    owner: project
    domain_of:
    - project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/gold
    alias: description
    owner: project
    domain_of:
    - biosample
    - dw_sequencing_product
    - ncbi_raw_sra_run
    - project
    - sra_experiment_v2
    - study
    range: string
    required: false
  specimen_id:
    name: specimen_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: specimen_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  nucleic_acid:
    name: nucleic_acid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: nucleic_acid
    owner: project
    domain_of:
    - project
    range: string
    required: false
  ncbi_sra_id:
    name: ncbi_sra_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ncbi_sra_id
    owner: project
    domain_of:
    - project
    range: string
    required: false
  ncbi_locus_tag:
    name: ncbi_locus_tag
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: ncbi_locus_tag
    owner: project
    domain_of:
    - project
    range: string
    required: false
  organism_type:
    name: organism_type
    from_schema: https://w3id.org/jgi/gold
    alias: organism_type
    owner: project
    domain_of:
    - organism_v2
    - project
    range: string
    required: false
  sequencing_status_id:
    name: sequencing_status_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sequencing_status_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  sequencing_quality_id:
    name: sequencing_quality_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sequencing_quality_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  low_quality_genome:
    name: low_quality_genome
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: low_quality_genome
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sequencing_comments:
    name: sequencing_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sequencing_comments
    owner: project
    domain_of:
    - project
    range: string
    required: false
  chromosome_count:
    name: chromosome_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: chromosome_count
    owner: project
    domain_of:
    - project
    range: float
    required: false
  plasmid_count:
    name: plasmid_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: plasmid_count
    owner: project
    domain_of:
    - project
    range: float
    required: false
  scaffold_count:
    name: scaffold_count
    from_schema: https://w3id.org/jgi/gold
    alias: scaffold_count
    owner: project
    domain_of:
    - analysis_project
    - ncbi_assembly
    - project
    range: float
    required: false
  est_count:
    name: est_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: est_count
    owner: project
    domain_of:
    - project
    range: float
    required: false
  submitter_id:
    name: submitter_id
    from_schema: https://w3id.org/jgi/gold
    alias: submitter_id
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    - sra_experiment_v2
    range: float
    required: false
  project_comments:
    name: project_comments
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_comments
    owner: project
    domain_of:
    - project
    range: string
    required: false
  annotator_comments:
    name: annotator_comments
    from_schema: https://w3id.org/jgi/gold
    alias: annotator_comments
    owner: project
    domain_of:
    - analysis_project
    - biosample
    - organism_v2
    - project
    range: string
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gpts_proposal_id
    owner: project
    domain_of:
    - project
    - study
    range: float
    required: false
  gpts_sample_id:
    name: gpts_sample_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gpts_sample_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  gpts_disambiguator:
    name: gpts_disambiguator
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: gpts_disambiguator
    owner: project
    domain_of:
    - project
    range: string
    required: false
  library_method:
    name: library_method
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: library_method
    owner: project
    domain_of:
    - project
    range: string
    required: false
  read_count:
    name: read_count
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: read_count
    owner: project
    domain_of:
    - project
    range: string
    required: false
  vector:
    name: vector
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: vector
    owner: project
    domain_of:
    - project
    range: string
    required: false
  read_size:
    name: read_size
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: read_size
    owner: project
    domain_of:
    - project
    range: string
    required: false
  assembly_accession:
    name: assembly_accession
    from_schema: https://w3id.org/jgi/gold
    alias: assembly_accession
    owner: project
    domain_of:
    - ncbi_assembly
    - project
    range: string
    required: false
  nucleic_acid_id:
    name: nucleic_acid_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: nucleic_acid_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  gc_percent:
    name: gc_percent
    from_schema: https://w3id.org/jgi/gold
    alias: gc_percent
    owner: project
    domain_of:
    - ncbi_assembly
    - project
    range: float
    required: false
  contig_count:
    name: contig_count
    from_schema: https://w3id.org/jgi/gold
    alias: contig_count
    owner: project
    domain_of:
    - analysis_project
    - ncbi_assembly
    - project
    range: float
    required: false
  est_size:
    name: est_size
    from_schema: https://w3id.org/jgi/gold
    alias: est_size
    owner: project
    domain_of:
    - analysis_project
    - project
    range: float
    required: false
  completion_date:
    name: completion_date
    from_schema: https://w3id.org/jgi/gold
    alias: completion_date
    owner: project
    domain_of:
    - analysis_project
    - project
    range: datetime
    required: false
  finishing_goal_id:
    name: finishing_goal_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: finishing_goal_id
    owner: project
    domain_of:
    - project
    range: float
    required: false
  public_ap_count:
    name: public_ap_count
    from_schema: https://w3id.org/jgi/gold
    alias: public_ap_count
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  admin_ap_count:
    name: admin_ap_count
    from_schema: https://w3id.org/jgi/gold
    alias: admin_ap_count
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  public_dap_count:
    name: public_dap_count
    from_schema: https://w3id.org/jgi/gold
    alias: public_dap_count
    owner: project
    domain_of:
    - biosample
    - project
    - study
    range: float
    required: false
  admin_dap_count:
    name: admin_dap_count
    from_schema: https://w3id.org/jgi/gold
    alias: admin_dap_count
    owner: project
    domain_of:
    - biosample
    - project
    - study
    range: float
    required: false
  sra_srs_accession:
    name: sra_srs_accession
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sra_srs_accession
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sra_srx_accession:
    name: sra_srx_accession
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sra_srx_accession
    owner: project
    domain_of:
    - project
    - sigs_view
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: funding_program
    owner: project
    domain_of:
    - project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: funding_year
    owner: project
    domain_of:
    - project
    range: float
    required: false
  experimental_conditions:
    name: experimental_conditions
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: experimental_conditions
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sample_group_name:
    name: sample_group_name
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sample_group_name
    owner: project
    domain_of:
    - project
    range: string
    required: false
  project_subtype:
    name: project_subtype
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: project_subtype
    owner: project
    domain_of:
    - project
    range: string
    required: false
  single_cell_lysis_prot:
    name: single_cell_lysis_prot
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: single_cell_lysis_prot
    owner: project
    domain_of:
    - project
    range: string
    required: false
  wga_amp_appr:
    name: wga_amp_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: wga_amp_appr
    owner: project
    domain_of:
    - project
    range: string
    required: false
  sort_tech:
    name: sort_tech
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: sort_tech
    owner: project
    domain_of:
    - project
    range: string
    required: false
  single_cell_lysis_appr:
    name: single_cell_lysis_appr
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: single_cell_lysis_appr
    owner: project
    domain_of:
    - project
    range: string
    required: false
  library_layout:
    name: library_layout
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: library_layout
    owner: project
    domain_of:
    - project
    - sra_experiment_v2
    range: string
    required: false
  contam_screen_input:
    name: contam_screen_input
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: contam_screen_input
    owner: project
    domain_of:
    - project
    range: string
    required: false
  wga_amp_kit:
    name: wga_amp_kit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: wga_amp_kit
    owner: project
    domain_of:
    - project
    range: string
    required: false
  nucl_acid_ext_lit:
    name: nucl_acid_ext_lit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: nucl_acid_ext_lit
    owner: project
    domain_of:
    - project
    range: string
    required: false
  nucl_acid_amp_lit:
    name: nucl_acid_amp_lit
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: nucl_acid_amp_lit
    owner: project
    domain_of:
    - project
    range: string
    required: false
  library_screen:
    name: library_screen
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: library_screen
    owner: project
    domain_of:
    - project
    range: string
    required: false
  pcr_primers:
    name: pcr_primers
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: pcr_primers
    owner: project
    domain_of:
    - project
    range: string
    required: false
  multiplex_identifiers:
    name: multiplex_identifiers
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: multiplex_identifiers
    owner: project
    domain_of:
    - project
    range: string
    required: false
  adapters:
    name: adapters
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: adapters
    owner: project
    domain_of:
    - project
    range: string
    required: false
  pcr_cond:
    name: pcr_cond
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: pcr_cond
    owner: project
    domain_of:
    - project
    range: string
    required: false
  target_gene:
    name: target_gene
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: target_gene
    owner: project
    domain_of:
    - project
    range: string
    required: false
  target_subfragment:
    name: target_subfragment
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: target_subfragment
    owner: project
    domain_of:
    - project
    range: string
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/gold
    alias: its_data_utilization_status
    owner: project
    domain_of:
    - analysis_project
    - project
    range: string
    required: false
  its_source_sample_pid:
    name: its_source_sample_pid
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: its_source_sample_pid
    owner: project
    domain_of:
    - project
    range: string
    required: false
  is_jgi:
    name: is_jgi
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: is_jgi
    owner: project
    domain_of:
    - project
    range: string
    required: false
  is_draft:
    name: is_draft
    from_schema: https://w3id.org/jgi/gold
    alias: is_draft
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: string
    required: false
  is_test:
    name: is_test
    from_schema: https://w3id.org/jgi/gold
    alias: is_test
    owner: project
    domain_of:
    - analysis_project
    - biosample
    - ncbi_raw_sra_run
    - organism_v2
    - project
    - sra_experiment_v2
    - sra_sample_v2
    - study
    range: string
    required: false
  is_approved:
    name: is_approved
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: is_approved
    owner: project
    domain_of:
    - project
    range: string
    required: false
  is_locked:
    name: is_locked
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: is_locked
    owner: project
    domain_of:
    - project
    range: string
    required: false
  isolation_publication_id:
    name: isolation_publication_id
    from_schema: https://w3id.org/jgi/gold
    alias: isolation_publication_id
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false
  legacy_gold_id:
    name: legacy_gold_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: legacy_gold_id
    owner: project
    domain_of:
    - project
    - study
    range: string
    required: false
  old_legacy_gold_id:
    name: old_legacy_gold_id
    from_schema: https://w3id.org/jgi/gold
    rank: 1000
    alias: old_legacy_gold_id
    owner: project
    domain_of:
    - project
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/gold
    alias: project_oid
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    - study
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/gold
    alias: sample_oid
    owner: project
    domain_of:
    - biosample
    - organism_v2
    - project
    range: float
    required: false