Class: BiocycReactionExtLinks

URI: img_core_v400:BiocycReactionExtLinks

classDiagram class BiocycReactionExtLinks click BiocycReactionExtLinks href "../BiocycReactionExtLinks/" BiocycReactionExtLinks : db_name BiocycReactionExtLinks : id BiocycReactionExtLinks : unique_id BiocycReactionExtLinks --> "0..1" BiocycReaction : unique_id click BiocycReaction href "../BiocycReaction/"

Slots

Name	Cardinality and Range	Description	Inheritance
unique_id	0..1 BiocycReaction	Foreign key to biocyc_reaction	direct
id	0..1 String		direct
db_name	0..1 String		direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type	Mapped Value
self	img_core_v400:BiocycReactionExtLinks
native	img_core_v400:BiocycReactionExtLinks

LinkML Source

Direct

name: biocyc_reaction_ext_links
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  unique_id:
    name: unique_id
    description: Foreign key to biocyc_reaction
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: biocyc_reaction
    required: false
  id:
    name: id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false
  db_name:
    name: db_name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false

Induced

name: biocyc_reaction_ext_links
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  unique_id:
    name: unique_id
    description: Foreign key to biocyc_reaction
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: unique_id
    owner: biocyc_reaction_ext_links
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: biocyc_reaction
    required: false
  id:
    name: id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: id
    owner: biocyc_reaction_ext_links
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false
  db_name:
    name: db_name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: db_name
    owner: biocyc_reaction_ext_links
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false