Class: DtHtHits

URI: img_core_v400:DtHtHits

classDiagram class DtHtHits click DtHtHits href "../DtHtHits/" DtHtHits : gene_oid DtHtHits : homolog DtHtHits : phylo_level DtHtHits : phylo_val DtHtHits : rank DtHtHits : rev_gene_oid

Slots

Name	Cardinality and Range	Inheritance
gene_oid	0..1 Integer	direct
phylo_level	0..1 String	direct
phylo_val	0..1 String	direct
homolog	0..1 Integer	direct
rank	0..1 Integer	direct
rev_gene_oid	0..1 Integer	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type	Mapped Value
self	img_core_v400:DtHtHits
native	img_core_v400:DtHtHits

LinkML Source

Direct

name: dt_ht_hits
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  gene_oid:
    name: gene_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - actino_abc_genes
    - delete_genes
    - dt_ht_hits
    - dt_img_gene_prot_pep_sample
    - dt_phylum_dist_genes
    - dt_scog_genes
    - gene
    - gene_aliases
    - gene_biocyc_rxns
    - gene_cathfam
    - gene_cog_groups
    - gene_essential_genes
    - gene_exceptions
    - gene_ext_links
    - gene_feature_tags
    - gene_frag_coords
    - gene_go_terms
    - gene_img_interpro_hits
    - gene_ko_enzymes
    - gene_ko_enzymes_new
    - gene_ko_terms
    - gene_kog_groups
    - gene_notes
    - gene_paralogs
    - gene_pdb_xrefs
    - gene_pfam_families
    - gene_sig_peptides
    - gene_smart
    - gene_superfam
    - gene_tigrfams
    - gene_xref_families
    - kp_pseudo
    - merfs_gene_mapping
    - mv_gene_tmhmm_stats
    - tmp_genes
    range: integer
    required: false
  phylo_level:
    name: phylo_level
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - dt_ht_hits
    range: string
    required: false
  phylo_val:
    name: phylo_val
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - dt_ht_hits
    range: string
    required: false
  homolog:
    name: homolog
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - dt_ht_hits
    - dt_phylum_dist_genes
    range: integer
    required: false
  rank:
    name: rank
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - dt_ht_hits
    range: integer
    required: false
  rev_gene_oid:
    name: rev_gene_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - dt_ht_hits
    range: integer
    required: false

Induced

name: dt_ht_hits
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  gene_oid:
    name: gene_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: gene_oid
    owner: dt_ht_hits
    domain_of:
    - actino_abc_genes
    - delete_genes
    - dt_ht_hits
    - dt_img_gene_prot_pep_sample
    - dt_phylum_dist_genes
    - dt_scog_genes
    - gene
    - gene_aliases
    - gene_biocyc_rxns
    - gene_cathfam
    - gene_cog_groups
    - gene_essential_genes
    - gene_exceptions
    - gene_ext_links
    - gene_feature_tags
    - gene_frag_coords
    - gene_go_terms
    - gene_img_interpro_hits
    - gene_ko_enzymes
    - gene_ko_enzymes_new
    - gene_ko_terms
    - gene_kog_groups
    - gene_notes
    - gene_paralogs
    - gene_pdb_xrefs
    - gene_pfam_families
    - gene_sig_peptides
    - gene_smart
    - gene_superfam
    - gene_tigrfams
    - gene_xref_families
    - kp_pseudo
    - merfs_gene_mapping
    - mv_gene_tmhmm_stats
    - tmp_genes
    range: integer
    required: false
  phylo_level:
    name: phylo_level
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: phylo_level
    owner: dt_ht_hits
    domain_of:
    - dt_ht_hits
    range: string
    required: false
  phylo_val:
    name: phylo_val
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: phylo_val
    owner: dt_ht_hits
    domain_of:
    - dt_ht_hits
    range: string
    required: false
  homolog:
    name: homolog
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: homolog
    owner: dt_ht_hits
    domain_of:
    - dt_ht_hits
    - dt_phylum_dist_genes
    range: integer
    required: false
  rank:
    name: rank
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: rank
    owner: dt_ht_hits
    domain_of:
    - dt_ht_hits
    range: integer
    required: false
  rev_gene_oid:
    name: rev_gene_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: rev_gene_oid
    owner: dt_ht_hits
    domain_of:
    - dt_ht_hits
    range: integer
    required: false