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Class: EnzymeExtLinks

URI: img_core_v400:EnzymeExtLinks

classDiagram class EnzymeExtLinks click EnzymeExtLinks href "../EnzymeExtLinks/" EnzymeExtLinks : db_name EnzymeExtLinks --> "0..1" DbSource : db_name click DbSource href "../DbSource/" EnzymeExtLinks : ec_number EnzymeExtLinks : id

Slots

Name Cardinality and Range Description Inheritance
ec_number 0..1
String		 direct
db_name 0..1
DbSource		 Foreign key to db_source direct
id 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:EnzymeExtLinks
native img_core_v400:EnzymeExtLinks

LinkML Source

Direct

name: enzyme_ext_links
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ec_number:
    name: ec_number
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_protein_catalyzes
    - biocyc_reaction
    - enzyme
    - enzyme_enz_aliases
    - enzyme_ext_links
    - enzyme_products
    - enzyme_substrates
    - enzyme_transferred
    - gene_biocyc_rxns
    - ko2ec
    range: string
    required: false
  db_name:
    name: db_name
    description: Foreign key to db_source
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: db_source
    required: false
  id:
    name: id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false

Induced

name: enzyme_ext_links
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ec_number:
    name: ec_number
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ec_number
    owner: enzyme_ext_links
    domain_of:
    - biocyc_protein_catalyzes
    - biocyc_reaction
    - enzyme
    - enzyme_enz_aliases
    - enzyme_ext_links
    - enzyme_products
    - enzyme_substrates
    - enzyme_transferred
    - gene_biocyc_rxns
    - ko2ec
    range: string
    required: false
  db_name:
    name: db_name
    description: Foreign key to db_source
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: db_name
    owner: enzyme_ext_links
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: db_source
    required: false
  id:
    name: id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: id
    owner: enzyme_ext_links
    domain_of:
    - biocyc_comp_ext_links
    - biocyc_enzrxn_ext_links
    - biocyc_pathway_ext_links
    - biocyc_protein_ext_links
    - biocyc_reaction_ext_links
    - compound_ext_links
    - enzyme_ext_links
    - gene_cathfam
    - gene_ext_links
    - gene_pdb_xrefs
    - gene_smart
    - gene_superfam
    - gene_xref_families
    - pfam_family_ext_links
    - reaction_ext_links
    - scaffold_ext_links
    - taxon_ext_links
    range: string
    required: false