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Class: GoGraphPath

URI: img_core_v400:GoGraphPath

classDiagram class GoGraphPath click GoGraphPath href "../GoGraphPath/" GoGraphPath : add_date GoGraphPath : distance GoGraphPath : graph_path_id GoGraphPath : term_1 GoGraphPath --> "0..1" GoTerm : term_1 click GoTerm href "../GoTerm/" GoGraphPath : term_2 GoGraphPath --> "0..1" GoTerm : term_2 click GoTerm href "../GoTerm/"

Slots

Name Cardinality and Range Description Inheritance
graph_path_id 0..1
Integer		 direct
term_1 0..1
GoTerm		 Foreign key to go_term direct
term_2 0..1
GoTerm		 Foreign key to go_term direct
distance 0..1
Integer		 direct
add_date 0..1
Datetime		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:GoGraphPath
native img_core_v400:GoGraphPath

LinkML Source

Direct

name: go_graph_path
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  graph_path_id:
    name: graph_path_id
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - go_graph_path
    range: integer
    required: false
  term_1:
    name: term_1
    description: Foreign key to go_term
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - go_graph_path
    range: go_term
    required: false
  term_2:
    name: term_2
    description: Foreign key to go_term
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - go_graph_path
    range: go_term
    required: false
  distance:
    name: distance
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - go_graph_path
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false

Induced

name: go_graph_path
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  graph_path_id:
    name: graph_path_id
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: graph_path_id
    owner: go_graph_path
    domain_of:
    - go_graph_path
    range: integer
    required: false
  term_1:
    name: term_1
    description: Foreign key to go_term
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: term_1
    owner: go_graph_path
    domain_of:
    - go_graph_path
    range: go_term
    required: false
  term_2:
    name: term_2
    description: Foreign key to go_term
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: term_2
    owner: go_graph_path
    domain_of:
    - go_graph_path
    range: go_term
    required: false
  distance:
    name: distance
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: distance
    owner: go_graph_path
    domain_of:
    - go_graph_path
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: add_date
    owner: go_graph_path
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false