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Class: Interpro

URI: img_core_v400:Interpro

classDiagram class Interpro click Interpro href "../Interpro/" Interpro : ext_accession Interpro : name Interpro : type

Slots

Name Cardinality and Range Description Inheritance
ext_accession 0..1
String		 direct
name 0..1
String		 direct
type 0..1
String		 direct

Usages

used by used in type used
InterproGoTerms ext_accession range Interpro

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:Interpro
native img_core_v400:Interpro

LinkML Source

Direct

name: interpro
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ext_accession:
    name: ext_accession
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - compound
    - compound_aliases
    - compound_ext_links
    - gene_tigrfams
    - interpro
    - interpro_go_terms
    - pfam_clan
    - pfam_clan_pfam_families
    - pfam_family
    - pfam_family_cogs
    - pfam_family_ext_links
    - pfam_family_genome_properties
    - reaction
    - reaction_compounds
    - reaction_enzymes
    - reaction_ext_links
    - scaffold
    - tigrfam
    - tigrfam_enzymes
    - tigrfam_genome_properties
    - tigrfam_roles
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - accession_types
    - genome_property
    - interpro
    - pfam_family
    - scaffold_repeats
    range: string
    required: false

Induced

name: interpro
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ext_accession:
    name: ext_accession
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ext_accession
    owner: interpro
    domain_of:
    - alt_transcript
    - compound
    - compound_aliases
    - compound_ext_links
    - gene_tigrfams
    - interpro
    - interpro_go_terms
    - pfam_clan
    - pfam_clan_pfam_families
    - pfam_family
    - pfam_family_cogs
    - pfam_family_ext_links
    - pfam_family_genome_properties
    - reaction
    - reaction_compounds
    - reaction_enzymes
    - reaction_ext_links
    - scaffold
    - tigrfam
    - tigrfam_enzymes
    - tigrfam_genome_properties
    - tigrfam_roles
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: name
    owner: interpro
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: type
    owner: interpro
    domain_of:
    - accession_types
    - genome_property
    - interpro
    - pfam_family
    - scaffold_repeats
    range: string
    required: false