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Class: KeggGene

URI: img_core_v400:KeggGene

classDiagram class KeggGene click KeggGene href "../KeggGene/" KeggGene : aa_seq_length KeggGene : checksum KeggGene : kegg_gene_id

Slots

Name Cardinality and Range Description Inheritance
kegg_gene_id 0..1
String		 direct
aa_seq_length 0..1
Integer		 direct
checksum 0..1
String		 direct

Usages

used by used in type used
KeggGeneKoTerms kegg_gene_id range KeggGene
KeggGeneNcbiGeneIds kegg_gene_id range KeggGene
KeggGeneUniprotIds kegg_gene_id range KeggGene

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:KeggGene
native img_core_v400:KeggGene

LinkML Source

Direct

name: kegg_gene
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  kegg_gene_id:
    name: kegg_gene_id
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - kegg_gene
    - kegg_gene_ko_terms
    - kegg_gene_ncbi_gene_ids
    - kegg_gene_uniprot_ids
    range: string
    required: false
  aa_seq_length:
    name: aa_seq_length
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - gene
    - kegg_gene
    - kp_pseudo
    range: integer
    required: false
  checksum:
    name: checksum
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - kegg_gene
    range: string
    required: false

Induced

name: kegg_gene
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  kegg_gene_id:
    name: kegg_gene_id
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: kegg_gene_id
    owner: kegg_gene
    domain_of:
    - kegg_gene
    - kegg_gene_ko_terms
    - kegg_gene_ncbi_gene_ids
    - kegg_gene_uniprot_ids
    range: string
    required: false
  aa_seq_length:
    name: aa_seq_length
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: aa_seq_length
    owner: kegg_gene
    domain_of:
    - alt_transcript
    - gene
    - kegg_gene
    - kp_pseudo
    range: integer
    required: false
  checksum:
    name: checksum
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: checksum
    owner: kegg_gene
    domain_of:
    - kegg_gene
    range: string
    required: false