Class: KmImageRoi

URI: img_core_v400:KmImageRoi

classDiagram class KmImageRoi click KmImageRoi href "../KmImageRoi/" KmImageRoi : add_date KmImageRoi : coord_string KmImageRoi : height KmImageRoi : kegg_module KmImageRoi : roi_id KmImageRoi : roi_label KmImageRoi : roi_type KmImageRoi : shape KmImageRoi : width KmImageRoi : x_coord KmImageRoi : y_coord

Slots

Name	Cardinality and Range	Inheritance
roi_id	0..1 Integer	direct
shape	0..1 String	direct
roi_type	0..1 String	direct
roi_label	0..1 String	direct
x_coord	0..1 Integer	direct
y_coord	0..1 Integer	direct
height	0..1 Integer	direct
width	0..1 Integer	direct
add_date	0..1 Datetime	direct
coord_string	0..1 String	direct
kegg_module	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type	Mapped Value
self	img_core_v400:KmImageRoi
native	img_core_v400:KmImageRoi

LinkML Source

Direct

name: km_image_roi
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  roi_id:
    name: roi_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - image_roi_compounds
    - image_roi_enzymes
    - image_roi_ko_terms
    - image_roi_reactions
    - km_image_roi
    - km_image_roi_ko_terms
    range: integer
    required: false
  shape:
    name: shape
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_type:
    name: roi_type
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_label:
    name: roi_label
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  x_coord:
    name: x_coord
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  y_coord:
    name: y_coord
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  height:
    name: height
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  width:
    name: width
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  coord_string:
    name: coord_string
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  kegg_module:
    name: kegg_module
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - km_image_roi
    range: string
    required: false

Induced

name: km_image_roi
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  roi_id:
    name: roi_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: roi_id
    owner: km_image_roi
    domain_of:
    - image_roi
    - image_roi_compounds
    - image_roi_enzymes
    - image_roi_ko_terms
    - image_roi_reactions
    - km_image_roi
    - km_image_roi_ko_terms
    range: integer
    required: false
  shape:
    name: shape
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: shape
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_type:
    name: roi_type
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: roi_type
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_label:
    name: roi_label
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: roi_label
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  x_coord:
    name: x_coord
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: x_coord
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  y_coord:
    name: y_coord
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: y_coord
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  height:
    name: height
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: height
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  width:
    name: width
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: width
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: add_date
    owner: km_image_roi
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  coord_string:
    name: coord_string
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: coord_string
    owner: km_image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  kegg_module:
    name: kegg_module
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: kegg_module
    owner: km_image_roi
    domain_of:
    - km_image_roi
    range: string
    required: false