Class: KogFunction

URI: img_core_v400:KogFunction

classDiagram class KogFunction click KogFunction href "../KogFunction/" KogFunction : add_date KogFunction : definition KogFunction : function_code KogFunction : function_group

Slots

Name	Cardinality and Range	Inheritance
function_code	0..1 String	direct
definition	0..1 String	direct
function_group	0..1 String	direct
add_date	0..1 Datetime	direct

Usages

used by	used in	type	used
KogFunctions	functions	range	KogFunction
KogPathway	function	range	KogFunction

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type	Mapped Value
self	img_core_v400:KogFunction
native	img_core_v400:KogFunction

LinkML Source

Direct

name: kog_function
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  function_code:
    name: function_code
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - cog_function
    - kog_function
    range: string
    required: false
  definition:
    name: definition
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - cog_function
    - go_term
    - img_orf_type
    - kegg_module
    - ko_term
    - kog_function
    - smart
    range: string
    required: false
  function_group:
    name: function_group
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - cog_function
    - kog_function
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false

Induced

name: kog_function
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  function_code:
    name: function_code
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: function_code
    owner: kog_function
    domain_of:
    - cog_function
    - kog_function
    range: string
    required: false
  definition:
    name: definition
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: definition
    owner: kog_function
    domain_of:
    - cog_function
    - go_term
    - img_orf_type
    - kegg_module
    - ko_term
    - kog_function
    - smart
    range: string
    required: false
  function_group:
    name: function_group
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: function_group
    owner: kog_function
    domain_of:
    - cog_function
    - kog_function
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: add_date
    owner: kog_function
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false