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Class: PropertyStep

URI: img_core_v400:PropertyStep

classDiagram class PropertyStep click PropertyStep href "../PropertyStep/" PropertyStep : add_date PropertyStep : genome_property PropertyStep --> "0..1" GenomeProperty : genome_property click GenomeProperty href "../GenomeProperty/" PropertyStep : is_required PropertyStep : name PropertyStep : step_accession

Slots

Name Cardinality and Range Description Inheritance
step_accession 0..1
String		 direct
genome_property 0..1
GenomeProperty		 Foreign key to genome_property direct
name 0..1
String		 direct
is_required 0..1
Integer		 direct
add_date 0..1
Datetime		 direct

Usages

used by used in type used
PfamFamilyGenomeProperties PropertyStep range PropertyStep
PropertyStepEvidences step_accession range PropertyStep
TigrfamGenomeProperties PropertyStep range PropertyStep

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:PropertyStep
native img_core_v400:PropertyStep

LinkML Source

Direct

name: property_step
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  step_accession:
    name: step_accession
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - property_step
    - property_step_evidences
    range: string
    required: false
  genome_property:
    name: genome_property
    description: Foreign key to genome_property
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - property_step
    range: genome_property
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  is_required:
    name: is_required
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - property_step
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false

Induced

name: property_step
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  step_accession:
    name: step_accession
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: step_accession
    owner: property_step
    domain_of:
    - property_step
    - property_step_evidences
    range: string
    required: false
  genome_property:
    name: genome_property
    description: Foreign key to genome_property
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: genome_property
    owner: property_step
    domain_of:
    - property_step
    range: genome_property
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: name
    owner: property_step
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  is_required:
    name: is_required
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: is_required
    owner: property_step
    domain_of:
    - property_step
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: add_date
    owner: property_step
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false