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Class: ReactionCompounds

URI: img_core_v400:ReactionCompounds

classDiagram class ReactionCompounds click ReactionCompounds href "../ReactionCompounds/" ReactionCompounds : compounds ReactionCompounds --> "0..1" Compound : compounds click Compound href "../Compound/" ReactionCompounds : ext_accession ReactionCompounds --> "0..1" Reaction : ext_accession click Reaction href "../Reaction/"

Slots

Name Cardinality and Range Description Inheritance
ext_accession 0..1
Reaction		 Foreign key to reaction direct
compounds 0..1
Compound		 Foreign key to compound direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:ReactionCompounds
native img_core_v400:ReactionCompounds

LinkML Source

Direct

name: reaction_compounds
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ext_accession:
    name: ext_accession
    description: Foreign key to reaction
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - compound
    - compound_aliases
    - compound_ext_links
    - gene_tigrfams
    - interpro
    - interpro_go_terms
    - pfam_clan
    - pfam_clan_pfam_families
    - pfam_family
    - pfam_family_cogs
    - pfam_family_ext_links
    - pfam_family_genome_properties
    - reaction
    - reaction_compounds
    - reaction_enzymes
    - reaction_ext_links
    - scaffold
    - tigrfam
    - tigrfam_enzymes
    - tigrfam_genome_properties
    - tigrfam_roles
    range: reaction
    required: false
  compounds:
    name: compounds
    description: Foreign key to compound
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - image_roi_compounds
    - kegg_module_compounds
    - reaction_compounds
    range: compound
    required: false

Induced

name: reaction_compounds
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  ext_accession:
    name: ext_accession
    description: Foreign key to reaction
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ext_accession
    owner: reaction_compounds
    domain_of:
    - alt_transcript
    - compound
    - compound_aliases
    - compound_ext_links
    - gene_tigrfams
    - interpro
    - interpro_go_terms
    - pfam_clan
    - pfam_clan_pfam_families
    - pfam_family
    - pfam_family_cogs
    - pfam_family_ext_links
    - pfam_family_genome_properties
    - reaction
    - reaction_compounds
    - reaction_enzymes
    - reaction_ext_links
    - scaffold
    - tigrfam
    - tigrfam_enzymes
    - tigrfam_genome_properties
    - tigrfam_roles
    range: reaction
    required: false
  compounds:
    name: compounds
    description: Foreign key to compound
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: compounds
    owner: reaction_compounds
    domain_of:
    - image_roi_compounds
    - kegg_module_compounds
    - reaction_compounds
    range: compound
    required: false