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Class: Superfamily

URI: img_core_v400:Superfamily

classDiagram class Superfamily click Superfamily href "../Superfamily/" Superfamily : accession Superfamily : description Superfamily : name

Slots

Name Cardinality and Range Description Inheritance
name 0..1
String		 direct
accession 0..1
Integer		 direct
description 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:Superfamily
native img_core_v400:Superfamily

LinkML Source

Direct

name: superfamily
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  accession:
    name: accession
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - cath_funfam
    - smart
    - superfamily
    range: integer
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - alt_transcript
    - cath_funfam
    - cog
    - gene
    - gene_xref_families
    - genome_property
    - kegg_pathway
    - kog
    - pfam_clan
    - pfam_family
    - smart
    - superfamily
    - yesnocv
    range: string
    required: false

Induced

name: superfamily
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: name
    owner: superfamily
    domain_of:
    - alt_transcript
    - cog2014
    - cogfunc2014
    - db_source
    - dt_cog
    - dt_img_term
    - dt_ko
    - dt_pfam
    - dt_tfam
    - exclude_func
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    - superfamily
    range: string
    required: false
  accession:
    name: accession
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: accession
    owner: superfamily
    domain_of:
    - cath_funfam
    - smart
    - superfamily
    range: integer
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: description
    owner: superfamily
    domain_of:
    - alt_transcript
    - cath_funfam
    - cog
    - gene
    - gene_xref_families
    - genome_property
    - kegg_pathway
    - kog
    - pfam_clan
    - pfam_family
    - smart
    - superfamily
    - yesnocv
    range: string
    required: false