Class: TaxonKoCount
URI: img_core_v400:TaxonKoCount
classDiagram
class TaxonKoCount
click TaxonKoCount href "../TaxonKoCount/"
TaxonKoCount : data_type
TaxonKoCount : func_id
TaxonKoCount : gene_count
TaxonKoCount : taxon_oid
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| taxon_oid | 0..1 Integer |
direct | |
| data_type | 0..1 String |
direct | |
| func_id | 0..1 String |
direct | |
| gene_count | 0..1 Float |
direct |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/jgi/img_core_v400
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | img_core_v400:TaxonKoCount |
| native | img_core_v400:TaxonKoCount |
LinkML Source
Direct
name: taxon_ko_count
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
taxon_oid:
name: taxon_oid
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- asv5_taxons
- bcg_taxons
- dt_all_phylo_taxon_stats
- dt_cog_stats
- dt_kog_stats
- dt_phylo_taxon_stats
- dt_phylodist_new_taxons
- dt_phylum_dist_genes
- dt_phylum_dist_stats
- dt_scog_genes
- dt_taxon_kmodule_mcr
- img_iuig_tarballs_11202023
- img_umag_bin_tarballs_02062024
- imgnr_taxons_062123
- iso_plasmids
- kp_actino
- kp_taxons
- new_taxons
- new_taxons_batch
- old_taxons
- tarball_refresh_taxons
- taxon
- taxon_assembly_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_crispr_details
- taxon_crispr_summary
- taxon_dw
- taxon_ec_count
- taxon_ext_links
- taxon_gene_prefix
- taxon_gtdbtk_lineage
- taxon_ko_count
- taxon_pfam_count
- taxon_prod_vw
- taxon_replacements
- taxon_replacements_view
- taxon_scaf_prefix
- taxon_smart_count
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
- taxon_supfam_count
- taxon_taxon_scaffold_info
- taxon_tigr_count
- vw_gold_taxon
- vw_taxon_sc
range: integer
required: false
data_type:
name: data_type
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- dt_all_phylo_taxon_stats
- dt_phylo_taxon_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_gene_prefix
- taxon_ko_count
- taxon_pfam_count
- taxon_scaf_prefix
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: string
required: false
func_id:
name: func_id
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_ko_count
- taxon_pfam_count
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: string
required: false
gene_count:
name: gene_count
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- dt_phylum_dist_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_ko_count
- taxon_pfam_count
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: float
required: false
Induced
name: taxon_ko_count
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
taxon_oid:
name: taxon_oid
from_schema: https://w3id.org/jgi/img_core_v400
alias: taxon_oid
owner: taxon_ko_count
domain_of:
- asv5_taxons
- bcg_taxons
- dt_all_phylo_taxon_stats
- dt_cog_stats
- dt_kog_stats
- dt_phylo_taxon_stats
- dt_phylodist_new_taxons
- dt_phylum_dist_genes
- dt_phylum_dist_stats
- dt_scog_genes
- dt_taxon_kmodule_mcr
- img_iuig_tarballs_11202023
- img_umag_bin_tarballs_02062024
- imgnr_taxons_062123
- iso_plasmids
- kp_actino
- kp_taxons
- new_taxons
- new_taxons_batch
- old_taxons
- tarball_refresh_taxons
- taxon
- taxon_assembly_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_crispr_details
- taxon_crispr_summary
- taxon_dw
- taxon_ec_count
- taxon_ext_links
- taxon_gene_prefix
- taxon_gtdbtk_lineage
- taxon_ko_count
- taxon_pfam_count
- taxon_prod_vw
- taxon_replacements
- taxon_replacements_view
- taxon_scaf_prefix
- taxon_smart_count
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
- taxon_supfam_count
- taxon_taxon_scaffold_info
- taxon_tigr_count
- vw_gold_taxon
- vw_taxon_sc
range: integer
required: false
data_type:
name: data_type
from_schema: https://w3id.org/jgi/img_core_v400
alias: data_type
owner: taxon_ko_count
domain_of:
- dt_all_phylo_taxon_stats
- dt_phylo_taxon_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_gene_prefix
- taxon_ko_count
- taxon_pfam_count
- taxon_scaf_prefix
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: string
required: false
func_id:
name: func_id
from_schema: https://w3id.org/jgi/img_core_v400
alias: func_id
owner: taxon_ko_count
domain_of:
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_ko_count
- taxon_pfam_count
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: string
required: false
gene_count:
name: gene_count
from_schema: https://w3id.org/jgi/img_core_v400
alias: gene_count
owner: taxon_ko_count
domain_of:
- dt_phylum_dist_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_ec_count
- taxon_ko_count
- taxon_pfam_count
- taxon_smart_count
- taxon_supfam_count
- taxon_tigr_count
range: float
required: false