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Class: TaxonProdVw

URI: img_core_v400:TaxonProdVw

classDiagram class TaxonProdVw click TaxonProdVw href "../TaxonProdVw/" TaxonProdVw : add_date TaxonProdVw : analysis_product_name TaxonProdVw : analysis_project_id TaxonProdVw : analysis_project_type TaxonProdVw : ani_species TaxonProdVw : combined_sample_flag TaxonProdVw : comments TaxonProdVw : domain TaxonProdVw : family TaxonProdVw : funding_agency TaxonProdVw : genome_completion TaxonProdVw : genome_type TaxonProdVw : genus TaxonProdVw : gram_stain TaxonProdVw : has_coverage TaxonProdVw : high_quality_flag TaxonProdVw : host_ncbi_taxon_id TaxonProdVw : img_version TaxonProdVw : in_file TaxonProdVw : ir_class TaxonProdVw : ir_order TaxonProdVw : is_big_euk TaxonProdVw : is_pangenome TaxonProdVw : is_public TaxonProdVw : is_replaced TaxonProdVw : its_ap_id TaxonProdVw : jgi_project_id TaxonProdVw : jgi_rnd_flag TaxonProdVw : jgi_species_code TaxonProdVw : mod_date TaxonProdVw : modified_by TaxonProdVw : ncbi_species_code TaxonProdVw : ncbi_taxon_id TaxonProdVw : obsolete_flag TaxonProdVw : phylodist_date TaxonProdVw : phylodist_method TaxonProdVw : phylum TaxonProdVw : proposal_name TaxonProdVw : release_date TaxonProdVw : sample_gold_id TaxonProdVw : seq_center TaxonProdVw : seq_status TaxonProdVw : sequencing_gold_id TaxonProdVw : species TaxonProdVw : strain TaxonProdVw : study_gold_id TaxonProdVw : submission_id TaxonProdVw : taxon_display_name TaxonProdVw : taxon_oid

Slots

Name Cardinality and Range Description Inheritance
taxon_oid 0..1
Integer		 direct
genus 0..1
String		 direct
species 0..1
String		 direct
strain 0..1
String		 direct
taxon_display_name 0..1
String		 direct
ncbi_taxon_id 0..1
Integer		 direct
domain 0..1
String		 direct
phylum 0..1
String		 direct
ir_class 0..1
String		 direct
ir_order 0..1
String		 direct
family 0..1
String		 direct
jgi_species_code 0..1
String		 direct
comments 0..1
String		 direct
seq_status 0..1
String		 direct
seq_center 0..1
String		 direct
is_public 0..1
String		 direct
is_replaced 0..1
String		 direct
funding_agency 0..1
String		 direct
jgi_project_id 0..1
Integer		 direct
img_version 0..1
String		 direct
ncbi_species_code 0..1
String		 direct
release_date 0..1
Datetime		 direct
add_date 0..1
Datetime		 direct
is_big_euk 0..1
String		 direct
host_ncbi_taxon_id 0..1
Integer		 direct
mod_date 0..1
Datetime		 direct
modified_by 0..1
Integer		 direct
genome_type 0..1
String		 direct
gram_stain 0..1
String		 direct
obsolete_flag 0..1
String		 direct
is_pangenome 0..1
String		 direct
submission_id 0..1
Integer		 direct
phylodist_date 0..1
Datetime		 direct
proposal_name 0..1
String		 direct
sample_gold_id 0..1
String		 direct
phylodist_method 0..1
String		 direct
in_file 0..1
String		 direct
combined_sample_flag 0..1
String		 direct
high_quality_flag 0..1
String		 direct
analysis_project_id 0..1
String		 direct
ani_species 0..1
String		 direct
study_gold_id 0..1
String		 direct
sequencing_gold_id 0..1
String		 direct
genome_completion 0..1
Float		 direct
its_ap_id 0..1
Integer		 direct
analysis_product_name 0..1
String		 direct
analysis_project_type 0..1
String		 direct
jgi_rnd_flag 0..1
String		 direct
has_coverage 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:TaxonProdVw
native img_core_v400:TaxonProdVw

LinkML Source

Direct

name: taxon_prod_vw
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - asv5_taxons
    - bcg_taxons
    - dt_all_phylo_taxon_stats
    - dt_cog_stats
    - dt_kog_stats
    - dt_phylo_taxon_stats
    - dt_phylodist_new_taxons
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - dt_scog_genes
    - dt_taxon_kmodule_mcr
    - img_iuig_tarballs_11202023
    - img_umag_bin_tarballs_02062024
    - imgnr_taxons_062123
    - iso_plasmids
    - kp_actino
    - kp_taxons
    - new_taxons
    - new_taxons_batch
    - old_taxons
    - tarball_refresh_taxons
    - taxon
    - taxon_assembly_stats
    - taxon_cathfunfam_count
    - taxon_cog_count
    - taxon_crispr_details
    - taxon_crispr_summary
    - taxon_dw
    - taxon_ec_count
    - taxon_ext_links
    - taxon_gene_prefix
    - taxon_gtdbtk_lineage
    - taxon_ko_count
    - taxon_pfam_count
    - taxon_prod_vw
    - taxon_replacements
    - taxon_replacements_view
    - taxon_scaf_prefix
    - taxon_smart_count
    - taxon_smc_stats
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    - taxon_supfam_count
    - taxon_taxon_scaffold_info
    - taxon_tigr_count
    - vw_gold_taxon
    - vw_taxon_sc
    range: integer
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  taxon_display_name:
    name: taxon_display_name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    - vw_taxon_sc
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: integer
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - smart
    - taxon
    - taxon_prod_vw
    - vw_taxon_sc
    range: string
    required: false
  phylum:
    name: phylum
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  ir_class:
    name: ir_class
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  ir_order:
    name: ir_order
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  family:
    name: family
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - compound
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  jgi_species_code:
    name: jgi_species_code
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway_comments
    - biocyc_protein
    - biocyc_reaction
    - enzyme
    - enzyme_transferred
    - gene_sig_peptides
    - go_term
    - pfam_clan
    - pfam_dead
    - pfam_family
    - reaction
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  seq_center:
    name: seq_center
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  is_replaced:
    name: is_replaced
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  funding_agency:
    name: funding_agency
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  jgi_project_id:
    name: jgi_project_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  img_version:
    name: img_version
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - img_build
    - img_content_history
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: string
    required: false
  ncbi_species_code:
    name: ncbi_species_code
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  release_date:
    name: release_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - img_build
    - img_content_history
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: datetime
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  is_big_euk:
    name: is_big_euk
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  host_ncbi_taxon_id:
    name: host_ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - gene
    - img_orf_type
    - scaffold_stats
    - taxon
    - taxon_prod_vw
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - gene
    - img_orf_type
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  genome_type:
    name: genome_type
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  obsolete_flag:
    name: obsolete_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - gene
    - taxon
    - taxon_dw
    - taxon_prod_vw
    - vw_taxon_sc
    range: string
    required: false
  is_pangenome:
    name: is_pangenome
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_dw
    - taxon_prod_vw
    range: integer
    required: false
  phylodist_date:
    name: phylodist_date
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: datetime
    required: false
  proposal_name:
    name: proposal_name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  sample_gold_id:
    name: sample_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  phylodist_method:
    name: phylodist_method
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  in_file:
    name: in_file
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  combined_sample_flag:
    name: combined_sample_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  high_quality_flag:
    name: high_quality_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  analysis_project_id:
    name: analysis_project_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  ani_species:
    name: ani_species
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  study_gold_id:
    name: study_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  sequencing_gold_id:
    name: sequencing_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  genome_completion:
    name: genome_completion
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: float
    required: false
  its_ap_id:
    name: its_ap_id
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_dw
    - taxon_prod_vw
    range: integer
    required: false
  analysis_product_name:
    name: analysis_product_name
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  analysis_project_type:
    name: analysis_project_type
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  jgi_rnd_flag:
    name: jgi_rnd_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  has_coverage:
    name: has_coverage
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false

Induced

name: taxon_prod_vw
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: taxon_oid
    owner: taxon_prod_vw
    domain_of:
    - asv5_taxons
    - bcg_taxons
    - dt_all_phylo_taxon_stats
    - dt_cog_stats
    - dt_kog_stats
    - dt_phylo_taxon_stats
    - dt_phylodist_new_taxons
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - dt_scog_genes
    - dt_taxon_kmodule_mcr
    - img_iuig_tarballs_11202023
    - img_umag_bin_tarballs_02062024
    - imgnr_taxons_062123
    - iso_plasmids
    - kp_actino
    - kp_taxons
    - new_taxons
    - new_taxons_batch
    - old_taxons
    - tarball_refresh_taxons
    - taxon
    - taxon_assembly_stats
    - taxon_cathfunfam_count
    - taxon_cog_count
    - taxon_crispr_details
    - taxon_crispr_summary
    - taxon_dw
    - taxon_ec_count
    - taxon_ext_links
    - taxon_gene_prefix
    - taxon_gtdbtk_lineage
    - taxon_ko_count
    - taxon_pfam_count
    - taxon_prod_vw
    - taxon_replacements
    - taxon_replacements_view
    - taxon_scaf_prefix
    - taxon_smart_count
    - taxon_smc_stats
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    - taxon_supfam_count
    - taxon_taxon_scaffold_info
    - taxon_tigr_count
    - vw_gold_taxon
    - vw_taxon_sc
    range: integer
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: genus
    owner: taxon_prod_vw
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: species
    owner: taxon_prod_vw
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: strain
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  taxon_display_name:
    name: taxon_display_name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: taxon_display_name
    owner: taxon_prod_vw
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    - vw_taxon_sc
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ncbi_taxon_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: integer
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: domain
    owner: taxon_prod_vw
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - smart
    - taxon
    - taxon_prod_vw
    - vw_taxon_sc
    range: string
    required: false
  phylum:
    name: phylum
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: phylum
    owner: taxon_prod_vw
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  ir_class:
    name: ir_class
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ir_class
    owner: taxon_prod_vw
    domain_of:
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  ir_order:
    name: ir_order
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ir_order
    owner: taxon_prod_vw
    domain_of:
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  family:
    name: family
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: family
    owner: taxon_prod_vw
    domain_of:
    - compound
    - imgnr_taxons_062123
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  jgi_species_code:
    name: jgi_species_code
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: jgi_species_code
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: comments
    owner: taxon_prod_vw
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway_comments
    - biocyc_protein
    - biocyc_reaction
    - enzyme
    - enzyme_transferred
    - gene_sig_peptides
    - go_term
    - pfam_clan
    - pfam_dead
    - pfam_family
    - reaction
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: seq_status
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  seq_center:
    name: seq_center
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: seq_center
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: is_public
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  is_replaced:
    name: is_replaced
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: is_replaced
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  funding_agency:
    name: funding_agency
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: funding_agency
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  jgi_project_id:
    name: jgi_project_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: jgi_project_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  img_version:
    name: img_version
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: img_version
    owner: taxon_prod_vw
    domain_of:
    - img_build
    - img_content_history
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: string
    required: false
  ncbi_species_code:
    name: ncbi_species_code
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ncbi_species_code
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  release_date:
    name: release_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: release_date
    owner: taxon_prod_vw
    domain_of:
    - img_build
    - img_content_history
    - taxon
    - taxon_prod_vw
    - taxon_replacements
    range: datetime
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: add_date
    owner: taxon_prod_vw
    domain_of:
    - bcg_taxons
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - gene
    - gene_biocyc_rxns
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - paralog_group
    - pfam_clan
    - pfam_family
    - positional_cluster
    - property_step
    - reaction
    - scaffold
    - taxon
    - taxon_prod_vw
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  is_big_euk:
    name: is_big_euk
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: is_big_euk
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  host_ncbi_taxon_id:
    name: host_ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: host_ncbi_taxon_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: mod_date
    owner: taxon_prod_vw
    domain_of:
    - gene
    - img_orf_type
    - scaffold_stats
    - taxon
    - taxon_prod_vw
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: modified_by
    owner: taxon_prod_vw
    domain_of:
    - gene
    - img_orf_type
    - taxon
    - taxon_prod_vw
    range: integer
    required: false
  genome_type:
    name: genome_type
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: genome_type
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: gram_stain
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  obsolete_flag:
    name: obsolete_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: obsolete_flag
    owner: taxon_prod_vw
    domain_of:
    - gene
    - taxon
    - taxon_dw
    - taxon_prod_vw
    - vw_taxon_sc
    range: string
    required: false
  is_pangenome:
    name: is_pangenome
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: is_pangenome
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: submission_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_dw
    - taxon_prod_vw
    range: integer
    required: false
  phylodist_date:
    name: phylodist_date
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: phylodist_date
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: datetime
    required: false
  proposal_name:
    name: proposal_name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: proposal_name
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  sample_gold_id:
    name: sample_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: sample_gold_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  phylodist_method:
    name: phylodist_method
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: phylodist_method
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  in_file:
    name: in_file
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: in_file
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  combined_sample_flag:
    name: combined_sample_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: combined_sample_flag
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  high_quality_flag:
    name: high_quality_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: high_quality_flag
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  analysis_project_id:
    name: analysis_project_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: analysis_project_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  ani_species:
    name: ani_species
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: ani_species
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  study_gold_id:
    name: study_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: study_gold_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  sequencing_gold_id:
    name: sequencing_gold_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: sequencing_gold_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  genome_completion:
    name: genome_completion
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: genome_completion
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: float
    required: false
  its_ap_id:
    name: its_ap_id
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: its_ap_id
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_dw
    - taxon_prod_vw
    range: integer
    required: false
  analysis_product_name:
    name: analysis_product_name
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: analysis_product_name
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  analysis_project_type:
    name: analysis_project_type
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: analysis_project_type
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    - vw_gold_taxon
    range: string
    required: false
  jgi_rnd_flag:
    name: jgi_rnd_flag
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: jgi_rnd_flag
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false
  has_coverage:
    name: has_coverage
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: has_coverage
    owner: taxon_prod_vw
    domain_of:
    - taxon
    - taxon_prod_vw
    range: string
    required: false