Class: TaxonStatsMerfs
URI: img_core_v400:TaxonStatsMerfs
classDiagram
class TaxonStatsMerfs
click TaxonStatsMerfs href "../TaxonStatsMerfs/"
TaxonStatsMerfs : avg_gene_length
TaxonStatsMerfs : bin_count
TaxonStatsMerfs : cds_genes
TaxonStatsMerfs : cds_genes_pc
TaxonStatsMerfs : cog_clusters
TaxonStatsMerfs : crispr_count
TaxonStatsMerfs : datatype
TaxonStatsMerfs : euk_bin_count
TaxonStatsMerfs : euk_semibin_count
TaxonStatsMerfs : gc_percent
TaxonStatsMerfs : genes_in_biosynthetic
TaxonStatsMerfs : genes_in_biosynthetic_pc
TaxonStatsMerfs : genes_in_cathfunfam
TaxonStatsMerfs : genes_in_cathfunfam_pc
TaxonStatsMerfs : genes_in_cog
TaxonStatsMerfs : genes_in_cog_pc
TaxonStatsMerfs : genes_in_enzymes
TaxonStatsMerfs : genes_in_enzymes_pc
TaxonStatsMerfs : genes_in_kegg
TaxonStatsMerfs : genes_in_kegg_pc
TaxonStatsMerfs : genes_in_ko
TaxonStatsMerfs : genes_in_ko_pc
TaxonStatsMerfs : genes_in_metacyc
TaxonStatsMerfs : genes_in_metacyc_pc
TaxonStatsMerfs : genes_in_pfam
TaxonStatsMerfs : genes_in_pfam_pc
TaxonStatsMerfs : genes_in_smart
TaxonStatsMerfs : genes_in_smart_pc
TaxonStatsMerfs : genes_in_supfam
TaxonStatsMerfs : genes_in_supfam_pc
TaxonStatsMerfs : genes_in_tigrfam
TaxonStatsMerfs : genes_in_tigrfam_pc
TaxonStatsMerfs : genes_not_in_kegg
TaxonStatsMerfs : genes_not_in_kegg_pc
TaxonStatsMerfs : genes_not_in_ko
TaxonStatsMerfs : genes_not_in_ko_pc
TaxonStatsMerfs : genes_not_in_metacyc
TaxonStatsMerfs : genes_not_in_metacyc_pc
TaxonStatsMerfs : genes_w_func_pred
TaxonStatsMerfs : genes_w_func_pred_pc
TaxonStatsMerfs : mod_date
TaxonStatsMerfs : n_scaffolds
TaxonStatsMerfs : other_rna_genes
TaxonStatsMerfs : other_rna_genes_pc
TaxonStatsMerfs : pfam_clusters
TaxonStatsMerfs : predicted_plasmid_contigs
TaxonStatsMerfs : predicted_viral_contigs
TaxonStatsMerfs : rna_genes
TaxonStatsMerfs : rna_genes_pc
TaxonStatsMerfs : rrna16s_genes
TaxonStatsMerfs : rrna16s_genes_pc
TaxonStatsMerfs : rrna18s_genes
TaxonStatsMerfs : rrna18s_genes_pc
TaxonStatsMerfs : rrna23s_genes
TaxonStatsMerfs : rrna23s_genes_pc
TaxonStatsMerfs : rrna28s_genes
TaxonStatsMerfs : rrna28s_genes_pc
TaxonStatsMerfs : rrna5s_genes
TaxonStatsMerfs : rrna5s_genes_pc
TaxonStatsMerfs : rrna_genes
TaxonStatsMerfs : rrna_genes_pc
TaxonStatsMerfs : scaffolds_2kb
TaxonStatsMerfs : scaffolds_4kb
TaxonStatsMerfs : semibin_count
TaxonStatsMerfs : smc_bcgs
TaxonStatsMerfs : taxon_oid
TaxonStatsMerfs : tigrfam_clusters
TaxonStatsMerfs : total_bases
TaxonStatsMerfs : total_biosynthetic
TaxonStatsMerfs : total_coding_bases
TaxonStatsMerfs : total_gc
TaxonStatsMerfs : total_gene_count
TaxonStatsMerfs : trna_genes
TaxonStatsMerfs : trna_genes_pc
Slots
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/jgi/img_core_v400
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | img_core_v400:TaxonStatsMerfs |
| native | img_core_v400:TaxonStatsMerfs |
LinkML Source
Direct
name: taxon_stats_merfs
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
taxon_oid:
name: taxon_oid
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- asv5_taxons
- bcg_taxons
- dt_all_phylo_taxon_stats
- dt_cog_stats
- dt_kog_stats
- dt_phylo_taxon_stats
- dt_phylodist_new_taxons
- dt_phylum_dist_genes
- dt_phylum_dist_stats
- dt_scog_genes
- dt_taxon_kmodule_mcr
- img_iuig_tarballs_11202023
- img_umag_bin_tarballs_02062024
- imgnr_taxons_062123
- iso_plasmids
- kp_actino
- kp_taxons
- new_taxons
- new_taxons_batch
- old_taxons
- tarball_refresh_taxons
- taxon
- taxon_assembly_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_crispr_details
- taxon_crispr_summary
- taxon_dw
- taxon_ec_count
- taxon_ext_links
- taxon_gene_prefix
- taxon_gtdbtk_lineage
- taxon_ko_count
- taxon_pfam_count
- taxon_prod_vw
- taxon_replacements
- taxon_replacements_view
- taxon_scaf_prefix
- taxon_smart_count
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
- taxon_supfam_count
- taxon_taxon_scaffold_info
- taxon_tigr_count
- vw_gold_taxon
- vw_taxon_sc
range: integer
required: false
total_gene_count:
name: total_gene_count
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
cds_genes:
name: cds_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
cds_genes_pc:
name: cds_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rna_genes:
name: rna_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rna_genes_pc:
name: rna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna_genes:
name: rrna_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna_genes_pc:
name: rrna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna5s_genes:
name: rrna5s_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna5s_genes_pc:
name: rrna5s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna16s_genes:
name: rrna16s_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna16s_genes_pc:
name: rrna16s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna23s_genes:
name: rrna23s_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna23s_genes_pc:
name: rrna23s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
trna_genes:
name: trna_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
trna_genes_pc:
name: trna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
other_rna_genes:
name: other_rna_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
other_rna_genes_pc:
name: other_rna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_w_func_pred:
name: genes_w_func_pred
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_w_func_pred_pc:
name: genes_w_func_pred_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_enzymes:
name: genes_in_enzymes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_enzymes_pc:
name: genes_in_enzymes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_kegg:
name: genes_in_kegg
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_kegg_pc:
name: genes_in_kegg_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_kegg:
name: genes_not_in_kegg
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_kegg_pc:
name: genes_not_in_kegg_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_cog:
name: genes_in_cog
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_cog_pc:
name: genes_in_cog_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_pfam:
name: genes_in_pfam
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_pfam_pc:
name: genes_in_pfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
pfam_clusters:
name: pfam_clusters
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
n_scaffolds:
name: n_scaffolds
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
total_coding_bases:
name: total_coding_bases
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
total_gc:
name: total_gc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
gc_percent:
name: gc_percent
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- gene
- scaffold_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
total_bases:
name: total_bases
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
mod_date:
name: mod_date
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- gene
- img_orf_type
- scaffold_stats
- taxon
- taxon_prod_vw
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: datetime
required: false
rrna18s_genes:
name: rrna18s_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna18s_genes_pc:
name: rrna18s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna28s_genes:
name: rrna28s_genes
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna28s_genes_pc:
name: rrna28s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
avg_gene_length:
name: avg_gene_length
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: float
required: false
cog_clusters:
name: cog_clusters
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_metacyc:
name: genes_in_metacyc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_metacyc_pc:
name: genes_in_metacyc_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_metacyc:
name: genes_not_in_metacyc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_metacyc_pc:
name: genes_not_in_metacyc_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_ko:
name: genes_in_ko
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_ko_pc:
name: genes_in_ko_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_ko:
name: genes_not_in_ko
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_ko_pc:
name: genes_not_in_ko_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
crispr_count:
name: crispr_count
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_biosynthetic:
name: genes_in_biosynthetic
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: float
required: false
genes_in_biosynthetic_pc:
name: genes_in_biosynthetic_pc
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: float
required: false
total_biosynthetic:
name: total_biosynthetic
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
datatype:
name: datatype
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: string
required: false
genes_in_tigrfam:
name: genes_in_tigrfam
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
tigrfam_clusters:
name: tigrfam_clusters
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_tigrfam_pc:
name: genes_in_tigrfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
bin_count:
name: bin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
genes_in_smart:
name: genes_in_smart
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_smart_pc:
name: genes_in_smart_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_supfam:
name: genes_in_supfam
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_supfam_pc:
name: genes_in_supfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_cathfunfam:
name: genes_in_cathfunfam
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_cathfunfam_pc:
name: genes_in_cathfunfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
predicted_viral_contigs:
name: predicted_viral_contigs
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
scaffolds_2kb:
name: scaffolds_2kb
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
scaffolds_4kb:
name: scaffolds_4kb
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
predicted_plasmid_contigs:
name: predicted_plasmid_contigs
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
euk_bin_count:
name: euk_bin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
smc_bcgs:
name: smc_bcgs
from_schema: https://w3id.org/jgi/img_core_v400
domain_of:
- taxon_stats
- taxon_stats_merfs
range: integer
required: false
semibin_count:
name: semibin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
euk_semibin_count:
name: euk_semibin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
domain_of:
- taxon_stats_merfs
range: integer
required: false
Induced
name: taxon_stats_merfs
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
taxon_oid:
name: taxon_oid
from_schema: https://w3id.org/jgi/img_core_v400
alias: taxon_oid
owner: taxon_stats_merfs
domain_of:
- asv5_taxons
- bcg_taxons
- dt_all_phylo_taxon_stats
- dt_cog_stats
- dt_kog_stats
- dt_phylo_taxon_stats
- dt_phylodist_new_taxons
- dt_phylum_dist_genes
- dt_phylum_dist_stats
- dt_scog_genes
- dt_taxon_kmodule_mcr
- img_iuig_tarballs_11202023
- img_umag_bin_tarballs_02062024
- imgnr_taxons_062123
- iso_plasmids
- kp_actino
- kp_taxons
- new_taxons
- new_taxons_batch
- old_taxons
- tarball_refresh_taxons
- taxon
- taxon_assembly_stats
- taxon_cathfunfam_count
- taxon_cog_count
- taxon_crispr_details
- taxon_crispr_summary
- taxon_dw
- taxon_ec_count
- taxon_ext_links
- taxon_gene_prefix
- taxon_gtdbtk_lineage
- taxon_ko_count
- taxon_pfam_count
- taxon_prod_vw
- taxon_replacements
- taxon_replacements_view
- taxon_scaf_prefix
- taxon_smart_count
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
- taxon_supfam_count
- taxon_taxon_scaffold_info
- taxon_tigr_count
- vw_gold_taxon
- vw_taxon_sc
range: integer
required: false
total_gene_count:
name: total_gene_count
from_schema: https://w3id.org/jgi/img_core_v400
alias: total_gene_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
cds_genes:
name: cds_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: cds_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
cds_genes_pc:
name: cds_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: cds_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rna_genes:
name: rna_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rna_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rna_genes_pc:
name: rna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rna_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna_genes:
name: rrna_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna_genes_pc:
name: rrna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna5s_genes:
name: rrna5s_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna5s_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna5s_genes_pc:
name: rrna5s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna5s_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna16s_genes:
name: rrna16s_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna16s_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna16s_genes_pc:
name: rrna16s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna16s_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna23s_genes:
name: rrna23s_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna23s_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna23s_genes_pc:
name: rrna23s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna23s_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
trna_genes:
name: trna_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: trna_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
trna_genes_pc:
name: trna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: trna_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
other_rna_genes:
name: other_rna_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: other_rna_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
other_rna_genes_pc:
name: other_rna_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: other_rna_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_w_func_pred:
name: genes_w_func_pred
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_w_func_pred
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_w_func_pred_pc:
name: genes_w_func_pred_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_w_func_pred_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_enzymes:
name: genes_in_enzymes
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_enzymes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_enzymes_pc:
name: genes_in_enzymes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_enzymes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_kegg:
name: genes_in_kegg
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_kegg
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_kegg_pc:
name: genes_in_kegg_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_kegg_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_kegg:
name: genes_not_in_kegg
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_kegg
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_kegg_pc:
name: genes_not_in_kegg_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_kegg_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_cog:
name: genes_in_cog
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_cog
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_cog_pc:
name: genes_in_cog_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_cog_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_pfam:
name: genes_in_pfam
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_pfam
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_pfam_pc:
name: genes_in_pfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_pfam_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
pfam_clusters:
name: pfam_clusters
from_schema: https://w3id.org/jgi/img_core_v400
alias: pfam_clusters
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
n_scaffolds:
name: n_scaffolds
from_schema: https://w3id.org/jgi/img_core_v400
alias: n_scaffolds
owner: taxon_stats_merfs
domain_of:
- taxon_smc_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
total_coding_bases:
name: total_coding_bases
from_schema: https://w3id.org/jgi/img_core_v400
alias: total_coding_bases
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
total_gc:
name: total_gc
from_schema: https://w3id.org/jgi/img_core_v400
alias: total_gc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
gc_percent:
name: gc_percent
from_schema: https://w3id.org/jgi/img_core_v400
alias: gc_percent
owner: taxon_stats_merfs
domain_of:
- gene
- scaffold_stats
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
total_bases:
name: total_bases
from_schema: https://w3id.org/jgi/img_core_v400
alias: total_bases
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
mod_date:
name: mod_date
from_schema: https://w3id.org/jgi/img_core_v400
alias: mod_date
owner: taxon_stats_merfs
domain_of:
- gene
- img_orf_type
- scaffold_stats
- taxon
- taxon_prod_vw
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: datetime
required: false
rrna18s_genes:
name: rrna18s_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna18s_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna18s_genes_pc:
name: rrna18s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna18s_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
rrna28s_genes:
name: rrna28s_genes
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna28s_genes
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
rrna28s_genes_pc:
name: rrna28s_genes_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: rrna28s_genes_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
avg_gene_length:
name: avg_gene_length
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: avg_gene_length
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: float
required: false
cog_clusters:
name: cog_clusters
from_schema: https://w3id.org/jgi/img_core_v400
alias: cog_clusters
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_metacyc:
name: genes_in_metacyc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_metacyc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_metacyc_pc:
name: genes_in_metacyc_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_metacyc_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_metacyc:
name: genes_not_in_metacyc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_metacyc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_metacyc_pc:
name: genes_not_in_metacyc_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_metacyc_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_ko:
name: genes_in_ko
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_ko
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_ko_pc:
name: genes_in_ko_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_ko_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_not_in_ko:
name: genes_not_in_ko
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_ko
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_not_in_ko_pc:
name: genes_not_in_ko_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_not_in_ko_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
crispr_count:
name: crispr_count
from_schema: https://w3id.org/jgi/img_core_v400
alias: crispr_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_biosynthetic:
name: genes_in_biosynthetic
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: genes_in_biosynthetic
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: float
required: false
genes_in_biosynthetic_pc:
name: genes_in_biosynthetic_pc
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: genes_in_biosynthetic_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: float
required: false
total_biosynthetic:
name: total_biosynthetic
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: total_biosynthetic
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
datatype:
name: datatype
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: datatype
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: string
required: false
genes_in_tigrfam:
name: genes_in_tigrfam
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_tigrfam
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
tigrfam_clusters:
name: tigrfam_clusters
from_schema: https://w3id.org/jgi/img_core_v400
alias: tigrfam_clusters
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_tigrfam_pc:
name: genes_in_tigrfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_tigrfam_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
bin_count:
name: bin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: bin_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
genes_in_smart:
name: genes_in_smart
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_smart
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_smart_pc:
name: genes_in_smart_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_smart_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_supfam:
name: genes_in_supfam
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_supfam
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_supfam_pc:
name: genes_in_supfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_supfam_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
genes_in_cathfunfam:
name: genes_in_cathfunfam
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_cathfunfam
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
genes_in_cathfunfam_pc:
name: genes_in_cathfunfam_pc
from_schema: https://w3id.org/jgi/img_core_v400
alias: genes_in_cathfunfam_pc
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: float
required: false
predicted_viral_contigs:
name: predicted_viral_contigs
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: predicted_viral_contigs
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
scaffolds_2kb:
name: scaffolds_2kb
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: scaffolds_2kb
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
scaffolds_4kb:
name: scaffolds_4kb
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: scaffolds_4kb
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
predicted_plasmid_contigs:
name: predicted_plasmid_contigs
from_schema: https://w3id.org/jgi/img_core_v400
alias: predicted_plasmid_contigs
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
- taxon_stats_prod_vw
range: integer
required: false
euk_bin_count:
name: euk_bin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: euk_bin_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
smc_bcgs:
name: smc_bcgs
from_schema: https://w3id.org/jgi/img_core_v400
alias: smc_bcgs
owner: taxon_stats_merfs
domain_of:
- taxon_stats
- taxon_stats_merfs
range: integer
required: false
semibin_count:
name: semibin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: semibin_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false
euk_semibin_count:
name: euk_semibin_count
from_schema: https://w3id.org/jgi/img_core_v400
rank: 1000
alias: euk_semibin_count
owner: taxon_stats_merfs
domain_of:
- taxon_stats_merfs
range: integer
required: false