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Class: TaxonTaxonScaffoldInfo

URI: img_core_v400:TaxonTaxonScaffoldInfo

classDiagram class TaxonTaxonScaffoldInfo click TaxonTaxonScaffoldInfo href "../TaxonTaxonScaffoldInfo/" TaxonTaxonScaffoldInfo : max_value TaxonTaxonScaffoldInfo : min_value TaxonTaxonScaffoldInfo : scaf_prefix TaxonTaxonScaffoldInfo : taxon_oid

Slots

Name Cardinality and Range Description Inheritance
taxon_oid 0..1
Integer		 direct
scaf_prefix 0..1
String		 direct
min_value 0..1
Integer		 direct
max_value 0..1
Integer		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_core_v400

Mappings

Mapping Type Mapped Value
self img_core_v400:TaxonTaxonScaffoldInfo
native img_core_v400:TaxonTaxonScaffoldInfo

LinkML Source

Direct

name: taxon_taxon_scaffold_info
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    domain_of:
    - asv5_taxons
    - bcg_taxons
    - dt_all_phylo_taxon_stats
    - dt_cog_stats
    - dt_kog_stats
    - dt_phylo_taxon_stats
    - dt_phylodist_new_taxons
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - dt_scog_genes
    - dt_taxon_kmodule_mcr
    - img_iuig_tarballs_11202023
    - img_umag_bin_tarballs_02062024
    - imgnr_taxons_062123
    - iso_plasmids
    - kp_actino
    - kp_taxons
    - new_taxons
    - new_taxons_batch
    - old_taxons
    - tarball_refresh_taxons
    - taxon
    - taxon_assembly_stats
    - taxon_cathfunfam_count
    - taxon_cog_count
    - taxon_crispr_details
    - taxon_crispr_summary
    - taxon_dw
    - taxon_ec_count
    - taxon_ext_links
    - taxon_gene_prefix
    - taxon_gtdbtk_lineage
    - taxon_ko_count
    - taxon_pfam_count
    - taxon_prod_vw
    - taxon_replacements
    - taxon_replacements_view
    - taxon_scaf_prefix
    - taxon_smart_count
    - taxon_smc_stats
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    - taxon_supfam_count
    - taxon_taxon_scaffold_info
    - taxon_tigr_count
    - vw_gold_taxon
    - vw_taxon_sc
    range: integer
    required: false
  scaf_prefix:
    name: scaf_prefix
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - taxon_taxon_scaffold_info
    range: string
    required: false
  min_value:
    name: min_value
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - taxon_taxon_scaffold_info
    range: integer
    required: false
  max_value:
    name: max_value
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    domain_of:
    - taxon_taxon_scaffold_info
    range: integer
    required: false

Induced

name: taxon_taxon_scaffold_info
from_schema: https://w3id.org/jgi/img_core_v400
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_core_v400
    alias: taxon_oid
    owner: taxon_taxon_scaffold_info
    domain_of:
    - asv5_taxons
    - bcg_taxons
    - dt_all_phylo_taxon_stats
    - dt_cog_stats
    - dt_kog_stats
    - dt_phylo_taxon_stats
    - dt_phylodist_new_taxons
    - dt_phylum_dist_genes
    - dt_phylum_dist_stats
    - dt_scog_genes
    - dt_taxon_kmodule_mcr
    - img_iuig_tarballs_11202023
    - img_umag_bin_tarballs_02062024
    - imgnr_taxons_062123
    - iso_plasmids
    - kp_actino
    - kp_taxons
    - new_taxons
    - new_taxons_batch
    - old_taxons
    - tarball_refresh_taxons
    - taxon
    - taxon_assembly_stats
    - taxon_cathfunfam_count
    - taxon_cog_count
    - taxon_crispr_details
    - taxon_crispr_summary
    - taxon_dw
    - taxon_ec_count
    - taxon_ext_links
    - taxon_gene_prefix
    - taxon_gtdbtk_lineage
    - taxon_ko_count
    - taxon_pfam_count
    - taxon_prod_vw
    - taxon_replacements
    - taxon_replacements_view
    - taxon_scaf_prefix
    - taxon_smart_count
    - taxon_smc_stats
    - taxon_stats
    - taxon_stats_merfs
    - taxon_stats_prod_vw
    - taxon_supfam_count
    - taxon_taxon_scaffold_info
    - taxon_tigr_count
    - vw_gold_taxon
    - vw_taxon_sc
    range: integer
    required: false
  scaf_prefix:
    name: scaf_prefix
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: scaf_prefix
    owner: taxon_taxon_scaffold_info
    domain_of:
    - taxon_taxon_scaffold_info
    range: string
    required: false
  min_value:
    name: min_value
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: min_value
    owner: taxon_taxon_scaffold_info
    domain_of:
    - taxon_taxon_scaffold_info
    range: integer
    required: false
  max_value:
    name: max_value
    from_schema: https://w3id.org/jgi/img_core_v400
    rank: 1000
    alias: max_value
    owner: taxon_taxon_scaffold_info
    domain_of:
    - taxon_taxon_scaffold_info
    range: integer
    required: false