Skip to content

Class: PathwayNetworkImgPathways

URI: img_ext:PathwayNetworkImgPathways

classDiagram class PathwayNetworkImgPathways click PathwayNetworkImgPathways href "../PathwayNetworkImgPathways/" PathwayNetworkImgPathways : mod_date PathwayNetworkImgPathways : modified_by PathwayNetworkImgPathways : network_oid PathwayNetworkImgPathways --> "0..1" PathwayNetwork : network_oid click PathwayNetwork href "../PathwayNetwork/" PathwayNetworkImgPathways : pathway PathwayNetworkImgPathways --> "0..1" ImgPathway : pathway click ImgPathway href "../ImgPathway/"

Slots

Name Cardinality and Range Description Inheritance
network_oid 0..1
PathwayNetwork		 Foreign key to pathway_network direct
pathway 0..1
ImgPathway		 Foreign key to img_pathway direct
mod_date 0..1
Datetime		 direct
modified_by 0..1
Integer		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_ext

Mappings

Mapping Type Mapped Value
self img_ext:PathwayNetworkImgPathways
native img_ext:PathwayNetworkImgPathways

LinkML Source

Direct

name: pathway_network_img_pathways
from_schema: https://w3id.org/jgi/img_ext
attributes:
  network_oid:
    name: network_oid
    description: Foreign key to pathway_network
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - pathway_network
    - pathway_network_c_components
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_t_components
    - pathway_network_taxons
    range: pathway_network
    required: false
  pathway:
    name: pathway
    description: Foreign key to img_pathway
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - img_pathway_history
    - img_reaction_assoc_paths
    - pathway_network_img_pathways
    range: img_pathway
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: integer
    required: false

Induced

name: pathway_network_img_pathways
from_schema: https://w3id.org/jgi/img_ext
attributes:
  network_oid:
    name: network_oid
    description: Foreign key to pathway_network
    from_schema: https://w3id.org/jgi/img_ext
    alias: network_oid
    owner: pathway_network_img_pathways
    domain_of:
    - pathway_network
    - pathway_network_c_components
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_t_components
    - pathway_network_taxons
    range: pathway_network
    required: false
  pathway:
    name: pathway
    description: Foreign key to img_pathway
    from_schema: https://w3id.org/jgi/img_ext
    alias: pathway
    owner: pathway_network_img_pathways
    domain_of:
    - img_pathway_history
    - img_reaction_assoc_paths
    - pathway_network_img_pathways
    range: img_pathway
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_ext
    alias: mod_date
    owner: pathway_network_img_pathways
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_ext
    alias: modified_by
    owner: pathway_network_img_pathways
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: integer
    required: false