Class: PhenotypeRule

URI: img_ext:PhenotypeRule

classDiagram class PhenotypeRule click PhenotypeRule href "../PhenotypeRule/" PhenotypeRule : add_date PhenotypeRule : cv_type PhenotypeRule : cv_value PhenotypeRule : description PhenotypeRule : mod_date PhenotypeRule : modified_by PhenotypeRule : name PhenotypeRule : rule PhenotypeRule : rule_id PhenotypeRule : rule_type

Slots

Name	Cardinality and Range	Inheritance
rule_id	0..1 Float	direct
cv_type	0..1 String	direct
cv_value	0..1 String	direct
description	0..1 String	direct
rule	0..1 String	direct
add_date	0..1 Datetime	direct
mod_date	0..1 Datetime	direct
modified_by	0..1 Float	direct
rule_type	0..1 String	direct
name	0..1 String	direct

Usages

used by	used in	type	used
PhenotypeRuleTaxons	rule_id	range	PhenotypeRule

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_ext

Mappings

Mapping Type	Mapped Value
self	img_ext:PhenotypeRule
native	img_ext:PhenotypeRule

LinkML Source

Direct

name: phenotype_rule
from_schema: https://w3id.org/jgi/img_ext
attributes:
  rule_id:
    name: rule_id
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - phenotype_rule
    - phenotype_rule_taxons
    range: float
    required: false
  cv_type:
    name: cv_type
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - img_gold_phenotype
    - phenotype_rule
    range: string
    required: false
  cv_value:
    name: cv_value
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - img_gold_phenotype
    - phenotype_rule
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - assertioncv
    - componentcv
    - img_job_typecv
    - imgtermcv
    - mygene
    - pathway_network
    - phenotype_rule
    - public_set
    - statuscv
    - yesnocv
    range: string
    required: false
  rule:
    name: rule
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - phenotype_rule
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - gene_function_history
    - gene_history
    - img_compound
    - img_parts_list
    - img_parts_list_backup
    - img_parts_list_history
    - img_pathway
    - img_pathway_history
    - img_reaction
    - img_term
    - img_term_history
    - img_term_synonyms
    - mygene
    - myimg_job
    - pathway_network
    - phenotype_rule
    - public_set
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: float
    required: false
  rule_type:
    name: rule_type
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - phenotype_rule
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - db_source
    - mesh_dtree
    - np_activity_cv
    - phenotype_rule
    - public_set
    range: string
    required: false

Induced

name: phenotype_rule
from_schema: https://w3id.org/jgi/img_ext
attributes:
  rule_id:
    name: rule_id
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: rule_id
    owner: phenotype_rule
    domain_of:
    - phenotype_rule
    - phenotype_rule_taxons
    range: float
    required: false
  cv_type:
    name: cv_type
    from_schema: https://w3id.org/jgi/img_ext
    alias: cv_type
    owner: phenotype_rule
    domain_of:
    - img_gold_phenotype
    - phenotype_rule
    range: string
    required: false
  cv_value:
    name: cv_value
    from_schema: https://w3id.org/jgi/img_ext
    alias: cv_value
    owner: phenotype_rule
    domain_of:
    - img_gold_phenotype
    - phenotype_rule
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_ext
    alias: description
    owner: phenotype_rule
    domain_of:
    - assertioncv
    - componentcv
    - img_job_typecv
    - imgtermcv
    - mygene
    - pathway_network
    - phenotype_rule
    - public_set
    - statuscv
    - yesnocv
    range: string
    required: false
  rule:
    name: rule
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: rule
    owner: phenotype_rule
    domain_of:
    - phenotype_rule
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_ext
    alias: add_date
    owner: phenotype_rule
    domain_of:
    - gene_function_history
    - gene_history
    - img_compound
    - img_parts_list
    - img_parts_list_backup
    - img_parts_list_history
    - img_pathway
    - img_pathway_history
    - img_reaction
    - img_term
    - img_term_history
    - img_term_synonyms
    - mygene
    - myimg_job
    - pathway_network
    - phenotype_rule
    - public_set
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_ext
    alias: mod_date
    owner: phenotype_rule
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_ext
    alias: modified_by
    owner: phenotype_rule
    domain_of:
    - cell_localization
    - gene_img_functions
    - gene_myimg_functions
    - img_compound
    - img_compound_kegg_compounds
    - img_parts_list
    - img_parts_list_backup
    - img_pathway
    - img_pathway_assertions
    - img_pathway_taxons
    - img_reaction
    - img_term
    - img_term_synonyms
    - mygene
    - mygene_terms
    - myimg_bio_cluster_np
    - myimg_job
    - natural_product
    - np_biosynthesis_source
    - pathway_network
    - pathway_network_img_pathways
    - pathway_network_parents
    - pathway_network_parts_lists
    - pathway_network_taxons
    - phenotype_rule
    - phenotype_rule_taxons
    range: float
    required: false
  rule_type:
    name: rule_type
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: rule_type
    owner: phenotype_rule
    domain_of:
    - phenotype_rule
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_ext
    alias: name
    owner: phenotype_rule
    domain_of:
    - db_source
    - mesh_dtree
    - np_activity_cv
    - phenotype_rule
    - public_set
    range: string
    required: false