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Class: PublicSet

URI: img_ext:PublicSet

classDiagram class PublicSet click PublicSet href "../PublicSet/" PublicSet : add_date PublicSet : contact_oid PublicSet : description PublicSet : domain PublicSet : family PublicSet : genus PublicSet : ir_class PublicSet : ir_order PublicSet : name PublicSet : phylum PublicSet : scaffold_count PublicSet : set_id PublicSet : set_type PublicSet : species

Slots

Name Cardinality and Range Description Inheritance
name 0..1
String		 direct
set_type 0..1
String		 direct
contact_oid 0..1
Float		 direct
description 0..1
String		 direct
add_date 0..1
Datetime		 direct
scaffold_count 0..1
Float		 direct
domain 0..1
String		 direct
phylum 0..1
String		 direct
ir_class 0..1
String		 direct
ir_order 0..1
String		 direct
family 0..1
String		 direct
genus 0..1
String		 direct
species 0..1
String		 direct
set_id 0..1
Float		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_ext

Mappings

Mapping Type Mapped Value
self img_ext:PublicSet
native img_ext:PublicSet

LinkML Source

Direct

name: public_set
from_schema: https://w3id.org/jgi/img_ext
attributes:
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - db_source
    - mesh_dtree
    - np_activity_cv
    - phenotype_rule
    - public_set
    range: string
    required: false
  set_type:
    name: set_type
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - gene_myimg_groups
    - mygene_img_groups
    - public_set
    range: float
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - assertioncv
    - componentcv
    - img_job_typecv
    - imgtermcv
    - mygene
    - pathway_network
    - phenotype_rule
    - public_set
    - statuscv
    - yesnocv
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_ext
    domain_of:
    - gene_function_history
    - gene_history
    - img_compound
    - img_parts_list
    - img_parts_list_backup
    - img_parts_list_history
    - img_pathway
    - img_pathway_history
    - img_reaction
    - img_term
    - img_term_history
    - img_term_synonyms
    - mygene
    - myimg_job
    - pathway_network
    - phenotype_rule
    - public_set
    range: datetime
    required: false
  scaffold_count:
    name: scaffold_count
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: float
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  phylum:
    name: phylum
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  ir_class:
    name: ir_class
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  ir_order:
    name: ir_order
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  family:
    name: family
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: string
    required: false
  set_id:
    name: set_id
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    domain_of:
    - public_set
    range: float
    required: false

Induced

name: public_set
from_schema: https://w3id.org/jgi/img_ext
attributes:
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_ext
    alias: name
    owner: public_set
    domain_of:
    - db_source
    - mesh_dtree
    - np_activity_cv
    - phenotype_rule
    - public_set
    range: string
    required: false
  set_type:
    name: set_type
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: set_type
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_ext
    alias: contact_oid
    owner: public_set
    domain_of:
    - gene_myimg_groups
    - mygene_img_groups
    - public_set
    range: float
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_ext
    alias: description
    owner: public_set
    domain_of:
    - assertioncv
    - componentcv
    - img_job_typecv
    - imgtermcv
    - mygene
    - pathway_network
    - phenotype_rule
    - public_set
    - statuscv
    - yesnocv
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_ext
    alias: add_date
    owner: public_set
    domain_of:
    - gene_function_history
    - gene_history
    - img_compound
    - img_parts_list
    - img_parts_list_backup
    - img_parts_list_history
    - img_pathway
    - img_pathway_history
    - img_reaction
    - img_term
    - img_term_history
    - img_term_synonyms
    - mygene
    - myimg_job
    - pathway_network
    - phenotype_rule
    - public_set
    range: datetime
    required: false
  scaffold_count:
    name: scaffold_count
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: scaffold_count
    owner: public_set
    domain_of:
    - public_set
    range: float
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: domain
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  phylum:
    name: phylum
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: phylum
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  ir_class:
    name: ir_class
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: ir_class
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  ir_order:
    name: ir_order
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: ir_order
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  family:
    name: family
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: family
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: genus
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: species
    owner: public_set
    domain_of:
    - public_set
    range: string
    required: false
  set_id:
    name: set_id
    from_schema: https://w3id.org/jgi/img_ext
    rank: 1000
    alias: set_id
    owner: public_set
    domain_of:
    - public_set
    range: float
    required: false