Class: GoldMasterProject

URI: img_gold:GoldMasterProject

classDiagram class GoldMasterProject click GoldMasterProject href "../GoldMasterProject/" GoldMasterProject : active GoldMasterProject : add_date GoldMasterProject : description GoldMasterProject : funding_program GoldMasterProject : funding_year GoldMasterProject : gold_id GoldMasterProject : gpts_proposal_id GoldMasterProject : is_public GoldMasterProject : its_data_utilization_status GoldMasterProject : its_proposal_id GoldMasterProject : its_sample_id GoldMasterProject : its_spid GoldMasterProject : master_study_id GoldMasterProject : mod_date GoldMasterProject : ncbi_bioproject_accession GoldMasterProject : ncbi_bioproject_id GoldMasterProject : ncbi_biosample_accession GoldMasterProject : ncbi_locus_tag GoldMasterProject : organism_id GoldMasterProject : pmo_project_id GoldMasterProject : project_id GoldMasterProject : project_name GoldMasterProject : project_oid GoldMasterProject : project_status GoldMasterProject : sample_oid GoldMasterProject : sequencing_quality_id GoldMasterProject : sequencing_status_id GoldMasterProject : sequencing_strategy

Slots

Name	Cardinality and Range	Inheritance
project_id	0..1 Float	direct
gold_id	0..1 String	direct
project_name	0..1 String	direct
active	0..1 String	direct
is_public	0..1 String	direct
add_date	0..1 Datetime	direct
mod_date	0..1 Datetime	direct
master_study_id	0..1 Float	direct
organism_id	0..1 Float	direct
ncbi_bioproject_id	0..1 Float	direct
its_proposal_id	0..1 Float	direct
gpts_proposal_id	0..1 Float	direct
its_spid	0..1 Float	direct
its_sample_id	0..1 Float	direct
pmo_project_id	0..1 Float	direct
sequencing_strategy	0..1 String	direct
project_status	0..1 String	direct
ncbi_bioproject_accession	0..1 String	direct
ncbi_biosample_accession	0..1 String	direct
its_data_utilization_status	0..1 String	direct
sequencing_status_id	0..1 Float	direct
sequencing_quality_id	0..1 Float	direct
ncbi_locus_tag	0..1 String	direct
description	0..1 String	direct
funding_program	0..1 String	direct
funding_year	0..1 Float	direct
project_oid	0..1 Float	direct
sample_oid	0..1 Float	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_gold

Mappings

Mapping Type	Mapped Value
self	img_gold:GoldMasterProject
native	img_gold:GoldMasterProject

LinkML Source

Direct

name: gold_master_project
from_schema: https://w3id.org/jgi/img_gold
attributes:
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_hmp_project
    - gold_master_permission
    - gold_master_project
    - gold_master_project_analysis_project
    - gold_master_project_biosample
    - gold_master_project_collaborator
    - gold_master_project_genome_publication
    - gold_master_project_relevance
    - gold_master_project_sequencing_center
    - gold_master_project_sequencing_method
    - gold_master_sra_experiment
    - gold_sequencing_project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: string
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false
  master_study_id:
    name: master_study_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: float
    required: false
  organism_id:
    name: organism_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_analysis_project
    - gold_master_organism
    - gold_master_organism_biotic_rel
    - gold_master_organism_cell_arrangement
    - gold_master_organism_disease
    - gold_master_organism_energy_source
    - gold_master_organism_habitat
    - gold_master_organism_metabolism
    - gold_master_organism_phenotype
    - gold_master_permission
    - gold_master_project
    range: float
    required: false
  ncbi_bioproject_id:
    name: ncbi_bioproject_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: float
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_its_proposal
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  its_sample_id:
    name: its_sample_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: float
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  ncbi_bioproject_accession:
    name: ncbi_bioproject_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: string
    required: false
  ncbi_biosample_accession:
    name: ncbi_biosample_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: string
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  sequencing_status_id:
    name: sequencing_status_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: float
    required: false
  sequencing_quality_id:
    name: sequencing_quality_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: float
    required: false
  ncbi_locus_tag:
    name: ncbi_locus_tag
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_longhurst_code
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - gold_master_project
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    range: float
    required: false

Induced

name: gold_master_project
from_schema: https://w3id.org/jgi/img_gold
attributes:
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: project_id
    owner: gold_master_project
    domain_of:
    - gold_master_hmp_project
    - gold_master_permission
    - gold_master_project
    - gold_master_project_analysis_project
    - gold_master_project_biosample
    - gold_master_project_collaborator
    - gold_master_project_genome_publication
    - gold_master_project_relevance
    - gold_master_project_sequencing_center
    - gold_master_project_sequencing_method
    - gold_master_sra_experiment
    - gold_sequencing_project
    range: float
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: gold_id
    owner: gold_master_project
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: project_name
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: string
    required: false
  active:
    name: active
    from_schema: https://w3id.org/jgi/img_gold
    alias: active
    owner: gold_master_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_gold
    alias: is_public
    owner: gold_master_project
    domain_of:
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: add_date
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    alias: mod_date
    owner: gold_master_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false
  master_study_id:
    name: master_study_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: master_study_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: float
    required: false
  organism_id:
    name: organism_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: organism_id
    owner: gold_master_project
    domain_of:
    - gold_master_analysis_project
    - gold_master_organism
    - gold_master_organism_biotic_rel
    - gold_master_organism_cell_arrangement
    - gold_master_organism_disease
    - gold_master_organism_energy_source
    - gold_master_organism_habitat
    - gold_master_organism_metabolism
    - gold_master_organism_phenotype
    - gold_master_permission
    - gold_master_project
    range: float
    required: false
  ncbi_bioproject_id:
    name: ncbi_bioproject_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_bioproject_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: float
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_proposal_id
    owner: gold_master_project
    domain_of:
    - gold_master_its_proposal
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: gpts_proposal_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_spid
    owner: gold_master_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  its_sample_id:
    name: its_sample_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: its_sample_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: float
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: pmo_project_id
    owner: gold_master_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sequencing_strategy
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: project_status
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  ncbi_bioproject_accession:
    name: ncbi_bioproject_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_bioproject_accession
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: string
    required: false
  ncbi_biosample_accession:
    name: ncbi_biosample_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_biosample_accession
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: string
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_data_utilization_status
    owner: gold_master_project
    domain_of:
    - gold_analysis_project
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  sequencing_status_id:
    name: sequencing_status_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sequencing_status_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: float
    required: false
  sequencing_quality_id:
    name: sequencing_quality_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sequencing_quality_id
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: float
    required: false
  ncbi_locus_tag:
    name: ncbi_locus_tag
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_locus_tag
    owner: gold_master_project
    domain_of:
    - gold_master_project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_gold
    alias: description
    owner: gold_master_project
    domain_of:
    - gold_master_longhurst_code
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: funding_program
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: funding_year
    owner: gold_master_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: float
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/img_gold
    alias: project_oid
    owner: gold_master_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - gold_master_project
    range: float
    required: false
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/img_gold
    alias: sample_oid
    owner: gold_master_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    range: float
    required: false