Class: GoldSequencingProject

URI: img_gold:GoldSequencingProject

classDiagram class GoldSequencingProject click GoldSequencingProject href "../GoldSequencingProject/" GoldSequencingProject : add_date GoldSequencingProject : altitude GoldSequencingProject : altitude_in_meters GoldSequencingProject : altitude_in_meters2 GoldSequencingProject : bioproject_accession GoldSequencingProject : biosample_accession GoldSequencingProject : biosample_gold_id GoldSequencingProject : biotic_rel GoldSequencingProject : cell_shape GoldSequencingProject : chlorophyll_concentration GoldSequencingProject : clade GoldSequencingProject : comments GoldSequencingProject : contact_oid GoldSequencingProject : culture_type GoldSequencingProject : cultured GoldSequencingProject : date_collected GoldSequencingProject : depth GoldSequencingProject : depth_in_meters GoldSequencingProject : depth_in_meters2 GoldSequencingProject : description GoldSequencingProject : display_name GoldSequencingProject : domain GoldSequencingProject : ecosystem GoldSequencingProject : ecosystem_category GoldSequencingProject : ecosystem_subtype GoldSequencingProject : ecosystem_type GoldSequencingProject : ecotype GoldSequencingProject : elevation_in_meters GoldSequencingProject : elevation_in_meters2 GoldSequencingProject : funding_program GoldSequencingProject : funding_year GoldSequencingProject : genus GoldSequencingProject : geo_location GoldSequencingProject : gold_id GoldSequencingProject : gpts_proposal_id GoldSequencingProject : gram_stain GoldSequencingProject : hmp_id GoldSequencingProject : host_gender GoldSequencingProject : host_name GoldSequencingProject : host_ncbi_taxid GoldSequencingProject : img_taxon_oid GoldSequencingProject : iso_country GoldSequencingProject : isolation GoldSequencingProject : its_data_utilization_status GoldSequencingProject : its_proposal_id GoldSequencingProject : its_proposal_name GoldSequencingProject : its_spid GoldSequencingProject : latitude GoldSequencingProject : latitude_n GoldSequencingProject : legacy_project_type GoldSequencingProject : locus_tag GoldSequencingProject : longhurst_code GoldSequencingProject : longhurst_description GoldSequencingProject : longitude GoldSequencingProject : longitude_n GoldSequencingProject : mod_date GoldSequencingProject : modified_by GoldSequencingProject : motility GoldSequencingProject : mrn GoldSequencingProject : ncbi_class GoldSequencingProject : ncbi_family GoldSequencingProject : ncbi_genus GoldSequencingProject : ncbi_kingdom GoldSequencingProject : ncbi_order GoldSequencingProject : ncbi_phylum GoldSequencingProject : ncbi_project_id GoldSequencingProject : ncbi_species GoldSequencingProject : ncbi_taxon_id GoldSequencingProject : nitrate_concentration GoldSequencingProject : oxygen_concentration GoldSequencingProject : oxygen_req GoldSequencingProject : ph GoldSequencingProject : phylogeny GoldSequencingProject : pi_email GoldSequencingProject : pi_name GoldSequencingProject : pm_email GoldSequencingProject : pm_name GoldSequencingProject : pmo_project_id GoldSequencingProject : pressure GoldSequencingProject : project_id GoldSequencingProject : project_status GoldSequencingProject : proport_isolation GoldSequencingProject : proport_ocean GoldSequencingProject : proport_station GoldSequencingProject : proport_woa_dissolved_oxygen GoldSequencingProject : proport_woa_nitrate GoldSequencingProject : proport_woa_phosphate GoldSequencingProject : proport_woa_salinity GoldSequencingProject : proport_woa_silicate GoldSequencingProject : proport_woa_temperature GoldSequencingProject : replicate_num GoldSequencingProject : salinity GoldSequencingProject : salinity_concentration GoldSequencingProject : sample_body_site GoldSequencingProject : sample_body_subsite GoldSequencingProject : sample_collect_temp GoldSequencingProject : seq_quality GoldSequencingProject : seq_status GoldSequencingProject : sequencing_depth GoldSequencingProject : sequencing_quality GoldSequencingProject : sequencing_status GoldSequencingProject : sequencing_strategy GoldSequencingProject : species GoldSequencingProject : specific_ecosystem GoldSequencingProject : sporulation GoldSequencingProject : strain GoldSequencingProject : subsurface_depth_in_meters GoldSequencingProject : subsurface_depth_in_meters2 GoldSequencingProject : temp_range GoldSequencingProject : type_strain GoldSequencingProject : uncultured_type GoldSequencingProject : viral_group GoldSequencingProject : viral_subgroup GoldSequencingProject : visit_num

Slots

Name	Cardinality and Range	Inheritance
gold_id	0..1 String	direct
display_name	0..1 String	direct
strain	0..1 String	direct
phylogeny	0..1 String	direct
ncbi_taxon_id	0..1 String	direct
domain	0..1 String	direct
ncbi_kingdom	0..1 String	direct
ncbi_phylum	0..1 String	direct
ncbi_class	0..1 String	direct
ncbi_order	0..1 String	direct
ncbi_family	0..1 String	direct
ncbi_genus	0..1 String	direct
ncbi_species	0..1 String	direct
clade	0..1 String	direct
ncbi_project_id	0..1 Integer	direct
isolation	0..1 String	direct
oxygen_req	0..1 String	direct
cell_shape	0..1 String	direct
motility	0..1 String	direct
sporulation	0..1 String	direct
temp_range	0..1 String	direct
salinity	0..1 String	direct
comments	0..1 String	direct
seq_status	0..1 String	direct
img_taxon_oid	0..1 Integer	direct
add_date	0..1 Datetime	direct
mod_date	0..1 Datetime	direct
modified_by	0..1 Integer	direct
contact_oid	0..1 Integer	direct
iso_country	0..1 String	direct
date_collected	0..1 String	direct
geo_location	0..1 String	direct
latitude	0..1 String	direct
longitude	0..1 String	direct
altitude	0..1 String	direct
gram_stain	0..1 String	direct
host_name	0..1 String	direct
host_gender	0..1 String	direct
host_ncbi_taxid	0..1 Integer	direct
biotic_rel	0..1 String	direct
hmp_id	0..1 Integer	direct
locus_tag	0..1 String	direct
funding_program	0..1 String	direct
type_strain	0..1 String	direct
ecosystem	0..1 String	direct
ecosystem_category	0..1 String	direct
ecosystem_type	0..1 String	direct
ecosystem_subtype	0..1 String	direct
specific_ecosystem	0..1 String	direct
sample_body_site	0..1 String	direct
sample_body_subsite	0..1 String	direct
mrn	0..1 Integer	direct
visit_num	0..1 Integer	direct
replicate_num	0..1 Integer	direct
pmo_project_id	0..1 Integer	direct
project_id	0..1 Integer	direct
cultured	0..1 String	direct
uncultured_type	0..1 String	direct
culture_type	0..1 String	direct
bioproject_accession	0..1 String	direct
biosample_accession	0..1 String	direct
its_spid	0..1 Integer	direct
pi_email	0..1 String	direct
pi_name	0..1 String	direct
legacy_project_type	0..1 String	direct
seq_quality	0..1 String	direct
depth	0..1 String	direct
sequencing_strategy	0..1 String	direct
pm_email	0..1 String	direct
pm_name	0..1 String	direct
ecotype	0..1 String	direct
longhurst_code	0..1 String	direct
longhurst_description	0..1 String	direct
project_status	0..1 String	direct
sequencing_quality	0..1 String	direct
sequencing_depth	0..1 String	direct
genus	0..1 String	direct
species	0..1 String	direct
proport_ocean	0..1 String	direct
proport_isolation	0..1 String	direct
proport_station	0..1 String	direct
proport_woa_temperature	0..1 Float	direct
proport_woa_salinity	0..1 Float	direct
proport_woa_dissolved_oxygen	0..1 Float	direct
proport_woa_silicate	0..1 Float	direct
proport_woa_phosphate	0..1 Float	direct
proport_woa_nitrate	0..1 Float	direct
viral_group	0..1 String	direct
viral_subgroup	0..1 String	direct
gpts_proposal_id	0..1 Integer	direct
its_proposal_id	0..1 Integer	direct
sample_collect_temp	0..1 String	direct
pressure	0..1 String	direct
chlorophyll_concentration	0..1 String	direct
oxygen_concentration	0..1 String	direct
salinity_concentration	0..1 String	direct
nitrate_concentration	0..1 String	direct
ph	0..1 String	direct
sequencing_status	0..1 String	direct
funding_year	0..1 Integer	direct
latitude_n	0..1 Float	direct
longitude_n	0..1 Float	direct
altitude_in_meters	0..1 Float	direct
altitude_in_meters2	0..1 Float	direct
depth_in_meters	0..1 Float	direct
depth_in_meters2	0..1 Float	direct
elevation_in_meters	0..1 Float	direct
elevation_in_meters2	0..1 Float	direct
subsurface_depth_in_meters	0..1 Float	direct
subsurface_depth_in_meters2	0..1 Float	direct
its_data_utilization_status	0..1 String	direct
its_proposal_name	0..1 String	direct
biosample_gold_id	0..1 String	direct
description	0..1 String	direct

Usages

used by	used in	type	used
GoldSpCellArrangement	gold_id	range	GoldSequencingProject
GoldSpCollaborator	gold_id	range	GoldSequencingProject
GoldSpDisease	gold_id	range	GoldSequencingProject
GoldSpEnergySource	gold_id	range	GoldSequencingProject
GoldSpGenomePublications	gold_id	range	GoldSequencingProject
GoldSpHabitat	gold_id	range	GoldSequencingProject
GoldSpMetabolism	gold_id	range	GoldSequencingProject
GoldSpPhenotype	gold_id	range	GoldSequencingProject
GoldSpRelevance	gold_id	range	GoldSequencingProject
GoldSpSeqCenter	gold_id	range	GoldSequencingProject
GoldSpSeqMethod	gold_id	range	GoldSequencingProject
GoldSpStudyGoldId	gold_id	range	GoldSequencingProject

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_gold

Mappings

Mapping Type	Mapped Value
self	img_gold:GoldSequencingProject
native	img_gold:GoldSequencingProject

LinkML Source

Direct

name: gold_sequencing_project
from_schema: https://w3id.org/jgi/img_gold
attributes:
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  display_name:
    name: display_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  phylogeny:
    name: phylogeny
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_kingdom:
    name: ncbi_kingdom
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_phylum:
    name: ncbi_phylum
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_class:
    name: ncbi_class
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_order:
    name: ncbi_order
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_family:
    name: ncbi_family
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_genus:
    name: ncbi_genus
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_species:
    name: ncbi_species
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  clade:
    name: clade
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_project_id:
    name: ncbi_project_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  isolation:
    name: isolation
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  oxygen_req:
    name: oxygen_req
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  cell_shape:
    name: cell_shape
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  motility:
    name: motility
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  sporulation:
    name: sporulation
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  temp_range:
    name: temp_range
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  img_taxon_oid:
    name: img_taxon_oid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    - gold_study
    range: integer
    required: false
  iso_country:
    name: iso_country
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  date_collected:
    name: date_collected
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  geo_location:
    name: geo_location
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: string
    required: false
  host_ncbi_taxid:
    name: host_ncbi_taxid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  biotic_rel:
    name: biotic_rel
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  hmp_id:
    name: hmp_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_hmp_project
    - gold_sequencing_project
    range: integer
    required: false
  locus_tag:
    name: locus_tag
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  type_strain:
    name: type_strain
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  sample_body_site:
    name: sample_body_site
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sample_body_subsite:
    name: sample_body_subsite
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: integer
    required: false
  visit_num:
    name: visit_num
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  replicate_num:
    name: replicate_num
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_hmp_project
    - gold_master_permission
    - gold_master_project
    - gold_master_project_analysis_project
    - gold_master_project_biosample
    - gold_master_project_collaborator
    - gold_master_project_genome_publication
    - gold_master_project_relevance
    - gold_master_project_sequencing_center
    - gold_master_project_sequencing_method
    - gold_master_sra_experiment
    - gold_sequencing_project
    range: integer
    required: false
  cultured:
    name: cultured
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  uncultured_type:
    name: uncultured_type
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  culture_type:
    name: culture_type
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  bioproject_accession:
    name: bioproject_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  biosample_accession:
    name: biosample_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  pi_email:
    name: pi_email
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  pi_name:
    name: pi_name
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  legacy_project_type:
    name: legacy_project_type
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  seq_quality:
    name: seq_quality
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  pm_email:
    name: pm_email
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  pm_name:
    name: pm_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  ecotype:
    name: ecotype
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  longhurst_code:
    name: longhurst_code
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: string
    required: false
  longhurst_description:
    name: longhurst_description
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  sequencing_quality:
    name: sequencing_quality
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sequencing_depth:
    name: sequencing_depth
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_ocean:
    name: proport_ocean
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_isolation:
    name: proport_isolation
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_station:
    name: proport_station
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_woa_temperature:
    name: proport_woa_temperature
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_salinity:
    name: proport_woa_salinity
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_dissolved_oxygen:
    name: proport_woa_dissolved_oxygen
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_silicate:
    name: proport_woa_silicate
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_phosphate:
    name: proport_woa_phosphate
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_nitrate:
    name: proport_woa_nitrate
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  viral_group:
    name: viral_group
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  viral_subgroup:
    name: viral_subgroup
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_its_proposal
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  sample_collect_temp:
    name: sample_collect_temp
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  chlorophyll_concentration:
    name: chlorophyll_concentration
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  oxygen_concentration:
    name: oxygen_concentration
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  salinity_concentration:
    name: salinity_concentration
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  nitrate_concentration:
    name: nitrate_concentration
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sequencing_status:
    name: sequencing_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  latitude_n:
    name: latitude_n
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  longitude_n:
    name: longitude_n
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  altitude_in_meters:
    name: altitude_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  altitude_in_meters2:
    name: altitude_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  depth_in_meters:
    name: depth_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  depth_in_meters2:
    name: depth_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  elevation_in_meters:
    name: elevation_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  elevation_in_meters2:
    name: elevation_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  subsurface_depth_in_meters:
    name: subsurface_depth_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  subsurface_depth_in_meters2:
    name: subsurface_depth_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  its_proposal_name:
    name: its_proposal_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  biosample_gold_id:
    name: biosample_gold_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_longhurst_code
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false

Induced

name: gold_sequencing_project
from_schema: https://w3id.org/jgi/img_gold
attributes:
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: gold_id
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  display_name:
    name: display_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: display_name
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  strain:
    name: strain
    from_schema: https://w3id.org/jgi/img_gold
    alias: strain
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  phylogeny:
    name: phylogeny
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: phylogeny
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_taxon_id
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  domain:
    name: domain
    from_schema: https://w3id.org/jgi/img_gold
    alias: domain
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_kingdom:
    name: ncbi_kingdom
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_kingdom
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_phylum:
    name: ncbi_phylum
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_phylum
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_class:
    name: ncbi_class
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_class
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_order:
    name: ncbi_order
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_order
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_family:
    name: ncbi_family
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_family
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_genus:
    name: ncbi_genus
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_genus
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_species:
    name: ncbi_species
    from_schema: https://w3id.org/jgi/img_gold
    alias: ncbi_species
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  clade:
    name: clade
    from_schema: https://w3id.org/jgi/img_gold
    alias: clade
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ncbi_project_id:
    name: ncbi_project_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ncbi_project_id
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  isolation:
    name: isolation
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: isolation
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  oxygen_req:
    name: oxygen_req
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: oxygen_req
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  cell_shape:
    name: cell_shape
    from_schema: https://w3id.org/jgi/img_gold
    alias: cell_shape
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  motility:
    name: motility
    from_schema: https://w3id.org/jgi/img_gold
    alias: motility
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  sporulation:
    name: sporulation
    from_schema: https://w3id.org/jgi/img_gold
    alias: sporulation
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  temp_range:
    name: temp_range
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: temp_range
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  salinity:
    name: salinity
    from_schema: https://w3id.org/jgi/img_gold
    alias: salinity
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_gold
    alias: comments
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  seq_status:
    name: seq_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: seq_status
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  img_taxon_oid:
    name: img_taxon_oid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: img_taxon_oid
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_gold
    alias: add_date
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    range: datetime
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    alias: mod_date
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false
  modified_by:
    name: modified_by
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: modified_by
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: contact_oid
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    - gold_study
    range: integer
    required: false
  iso_country:
    name: iso_country
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: iso_country
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  date_collected:
    name: date_collected
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: date_collected
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  geo_location:
    name: geo_location
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: geo_location
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  latitude:
    name: latitude
    from_schema: https://w3id.org/jgi/img_gold
    alias: latitude
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  longitude:
    name: longitude
    from_schema: https://w3id.org/jgi/img_gold
    alias: longitude
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  altitude:
    name: altitude
    from_schema: https://w3id.org/jgi/img_gold
    alias: altitude
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  gram_stain:
    name: gram_stain
    from_schema: https://w3id.org/jgi/img_gold
    alias: gram_stain
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  host_name:
    name: host_name
    from_schema: https://w3id.org/jgi/img_gold
    alias: host_name
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  host_gender:
    name: host_gender
    from_schema: https://w3id.org/jgi/img_gold
    alias: host_gender
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: string
    required: false
  host_ncbi_taxid:
    name: host_ncbi_taxid
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: host_ncbi_taxid
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  biotic_rel:
    name: biotic_rel
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: biotic_rel
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  hmp_id:
    name: hmp_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: hmp_id
    owner: gold_sequencing_project
    domain_of:
    - gold_master_hmp_project
    - gold_sequencing_project
    range: integer
    required: false
  locus_tag:
    name: locus_tag
    from_schema: https://w3id.org/jgi/img_gold
    alias: locus_tag
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  funding_program:
    name: funding_program
    from_schema: https://w3id.org/jgi/img_gold
    alias: funding_program
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  type_strain:
    name: type_strain
    from_schema: https://w3id.org/jgi/img_gold
    alias: type_strain
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_category
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_type
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_subtype
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    alias: specific_ecosystem
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  sample_body_site:
    name: sample_body_site
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sample_body_site
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sample_body_subsite:
    name: sample_body_subsite
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sample_body_subsite
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  mrn:
    name: mrn
    from_schema: https://w3id.org/jgi/img_gold
    alias: mrn
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: integer
    required: false
  visit_num:
    name: visit_num
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: visit_num
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  replicate_num:
    name: replicate_num
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: replicate_num
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: integer
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: pmo_project_id
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  project_id:
    name: project_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: project_id
    owner: gold_sequencing_project
    domain_of:
    - gold_master_hmp_project
    - gold_master_permission
    - gold_master_project
    - gold_master_project_analysis_project
    - gold_master_project_biosample
    - gold_master_project_collaborator
    - gold_master_project_genome_publication
    - gold_master_project_relevance
    - gold_master_project_sequencing_center
    - gold_master_project_sequencing_method
    - gold_master_sra_experiment
    - gold_sequencing_project
    range: integer
    required: false
  cultured:
    name: cultured
    from_schema: https://w3id.org/jgi/img_gold
    alias: cultured
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  uncultured_type:
    name: uncultured_type
    from_schema: https://w3id.org/jgi/img_gold
    alias: uncultured_type
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  culture_type:
    name: culture_type
    from_schema: https://w3id.org/jgi/img_gold
    alias: culture_type
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  bioproject_accession:
    name: bioproject_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: bioproject_accession
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  biosample_accession:
    name: biosample_accession
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: biosample_accession
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_spid
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project_lookup2
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  pi_email:
    name: pi_email
    from_schema: https://w3id.org/jgi/img_gold
    alias: pi_email
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  pi_name:
    name: pi_name
    from_schema: https://w3id.org/jgi/img_gold
    alias: pi_name
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  legacy_project_type:
    name: legacy_project_type
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: legacy_project_type
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  seq_quality:
    name: seq_quality
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: seq_quality
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  depth:
    name: depth
    from_schema: https://w3id.org/jgi/img_gold
    alias: depth
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  sequencing_strategy:
    name: sequencing_strategy
    from_schema: https://w3id.org/jgi/img_gold
    alias: sequencing_strategy
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  pm_email:
    name: pm_email
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: pm_email
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  pm_name:
    name: pm_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: pm_name
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  ecotype:
    name: ecotype
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecotype
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  longhurst_code:
    name: longhurst_code
    from_schema: https://w3id.org/jgi/img_gold
    alias: longhurst_code
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_sequencing_project
    range: string
    required: false
  longhurst_description:
    name: longhurst_description
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: longhurst_description
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  project_status:
    name: project_status
    from_schema: https://w3id.org/jgi/img_gold
    alias: project_status
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  sequencing_quality:
    name: sequencing_quality
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sequencing_quality
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sequencing_depth:
    name: sequencing_depth
    from_schema: https://w3id.org/jgi/img_gold
    alias: sequencing_depth
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_sequencing_project
    range: string
    required: false
  genus:
    name: genus
    from_schema: https://w3id.org/jgi/img_gold
    alias: genus
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  species:
    name: species
    from_schema: https://w3id.org/jgi/img_gold
    alias: species
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_ocean:
    name: proport_ocean
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_ocean
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_isolation:
    name: proport_isolation
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_isolation
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_station:
    name: proport_station
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_station
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  proport_woa_temperature:
    name: proport_woa_temperature
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_temperature
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_salinity:
    name: proport_woa_salinity
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_salinity
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_dissolved_oxygen:
    name: proport_woa_dissolved_oxygen
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_dissolved_oxygen
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_silicate:
    name: proport_woa_silicate
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_silicate
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_phosphate:
    name: proport_woa_phosphate
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_phosphate
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  proport_woa_nitrate:
    name: proport_woa_nitrate
    from_schema: https://w3id.org/jgi/img_gold
    alias: proport_woa_nitrate
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: float
    required: false
  viral_group:
    name: viral_group
    from_schema: https://w3id.org/jgi/img_gold
    alias: viral_group
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  viral_subgroup:
    name: viral_subgroup
    from_schema: https://w3id.org/jgi/img_gold
    alias: viral_subgroup
    owner: gold_sequencing_project
    domain_of:
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  gpts_proposal_id:
    name: gpts_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: gpts_proposal_id
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  its_proposal_id:
    name: its_proposal_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_proposal_id
    owner: gold_sequencing_project
    domain_of:
    - gold_master_its_proposal
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  sample_collect_temp:
    name: sample_collect_temp
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sample_collect_temp
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  pressure:
    name: pressure
    from_schema: https://w3id.org/jgi/img_gold
    alias: pressure
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  chlorophyll_concentration:
    name: chlorophyll_concentration
    from_schema: https://w3id.org/jgi/img_gold
    alias: chlorophyll_concentration
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  oxygen_concentration:
    name: oxygen_concentration
    from_schema: https://w3id.org/jgi/img_gold
    alias: oxygen_concentration
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  salinity_concentration:
    name: salinity_concentration
    from_schema: https://w3id.org/jgi/img_gold
    alias: salinity_concentration
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  nitrate_concentration:
    name: nitrate_concentration
    from_schema: https://w3id.org/jgi/img_gold
    alias: nitrate_concentration
    owner: gold_sequencing_project
    domain_of:
    - gold_master_biosample
    - gold_master_organism
    - gold_sequencing_project
    range: string
    required: false
  ph:
    name: ph
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: ph
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  sequencing_status:
    name: sequencing_status
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: sequencing_status
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  funding_year:
    name: funding_year
    from_schema: https://w3id.org/jgi/img_gold
    alias: funding_year
    owner: gold_sequencing_project
    domain_of:
    - gold_master_project
    - gold_sequencing_project
    range: integer
    required: false
  latitude_n:
    name: latitude_n
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: latitude_n
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  longitude_n:
    name: longitude_n
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: longitude_n
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  altitude_in_meters:
    name: altitude_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: altitude_in_meters
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  altitude_in_meters2:
    name: altitude_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: altitude_in_meters2
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  depth_in_meters:
    name: depth_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: depth_in_meters
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  depth_in_meters2:
    name: depth_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: depth_in_meters2
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  elevation_in_meters:
    name: elevation_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: elevation_in_meters
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  elevation_in_meters2:
    name: elevation_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: elevation_in_meters2
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  subsurface_depth_in_meters:
    name: subsurface_depth_in_meters
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: subsurface_depth_in_meters
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  subsurface_depth_in_meters2:
    name: subsurface_depth_in_meters2
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: subsurface_depth_in_meters2
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: float
    required: false
  its_data_utilization_status:
    name: its_data_utilization_status
    from_schema: https://w3id.org/jgi/img_gold
    alias: its_data_utilization_status
    owner: gold_sequencing_project
    domain_of:
    - gold_analysis_project
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false
  its_proposal_name:
    name: its_proposal_name
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: its_proposal_name
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  biosample_gold_id:
    name: biosample_gold_id
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: biosample_gold_id
    owner: gold_sequencing_project
    domain_of:
    - gold_sequencing_project
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_gold
    alias: description
    owner: gold_sequencing_project
    domain_of:
    - gold_master_longhurst_code
    - gold_master_project
    - gold_sequencing_project
    range: string
    required: false