Class: GoldSpGenomePublications

URI: img_gold:GoldSpGenomePublications

classDiagram class GoldSpGenomePublications click GoldSpGenomePublications href "../GoldSpGenomePublications/" GoldSpGenomePublications : doi GoldSpGenomePublications : gold_id GoldSpGenomePublications --> "0..1" GoldSequencingProject : gold_id click GoldSequencingProject href "../GoldSequencingProject/" GoldSpGenomePublications : issue GoldSpGenomePublications : journal_name GoldSpGenomePublications : page GoldSpGenomePublications : publication_date GoldSpGenomePublications : pubmed_id GoldSpGenomePublications : title GoldSpGenomePublications : volume

Slots

Name	Cardinality and Range	Description	Inheritance
gold_id	0..1 GoldSequencingProject	Foreign key to gold_sequencing_project	direct
pubmed_id	0..1 Integer		direct
journal_name	0..1 String		direct
volume	0..1 String		direct
issue	0..1 String		direct
page	0..1 String		direct
title	0..1 String		direct
publication_date	0..1 String		direct
doi	0..1 String		direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_gold

Mappings

Mapping Type	Mapped Value
self	img_gold:GoldSpGenomePublications
native	img_gold:GoldSpGenomePublications

LinkML Source

Direct

name: gold_sp_genome_publications
from_schema: https://w3id.org/jgi/img_gold
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: gold_sequencing_project
    required: false
  pubmed_id:
    name: pubmed_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: integer
    required: false
  journal_name:
    name: journal_name
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_sp_genome_publications
    range: string
    required: false
  volume:
    name: volume
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  issue:
    name: issue
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  page:
    name: page
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  title:
    name: title
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_journal
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  publication_date:
    name: publication_date
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  doi:
    name: doi
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false

Induced

name: gold_sp_genome_publications
from_schema: https://w3id.org/jgi/img_gold
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/img_gold
    alias: gold_id
    owner: gold_sp_genome_publications
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: gold_sequencing_project
    required: false
  pubmed_id:
    name: pubmed_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: pubmed_id
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: integer
    required: false
  journal_name:
    name: journal_name
    from_schema: https://w3id.org/jgi/img_gold
    alias: journal_name
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_sp_genome_publications
    range: string
    required: false
  volume:
    name: volume
    from_schema: https://w3id.org/jgi/img_gold
    alias: volume
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  issue:
    name: issue
    from_schema: https://w3id.org/jgi/img_gold
    alias: issue
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  page:
    name: page
    from_schema: https://w3id.org/jgi/img_gold
    alias: page
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  title:
    name: title
    from_schema: https://w3id.org/jgi/img_gold
    alias: title
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_journal
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  publication_date:
    name: publication_date
    from_schema: https://w3id.org/jgi/img_gold
    alias: publication_date
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false
  doi:
    name: doi
    from_schema: https://w3id.org/jgi/img_gold
    alias: doi
    owner: gold_sp_genome_publications
    domain_of:
    - gold_ap_publications
    - gold_master_publication
    - gold_sp_genome_publications
    range: string
    required: false