Class: GoldStudy

URI: img_gold:GoldStudy

classDiagram class GoldStudy click GoldStudy href "../GoldStudy/" GoldStudy : contact_email GoldStudy : contact_oid GoldStudy : ecosystem GoldStudy : ecosystem_category GoldStudy : ecosystem_subtype GoldStudy : ecosystem_type GoldStudy : gold_id GoldStudy : mod_date GoldStudy : specific_ecosystem GoldStudy : study_id GoldStudy : study_name

Slots

Name	Cardinality and Range	Inheritance
study_id	0..1 Integer	direct
gold_id	0..1 String	direct
study_name	0..1 String	direct
contact_oid	0..1 Integer	direct
contact_email	0..1 String	direct
ecosystem	0..1 String	direct
ecosystem_category	0..1 String	direct
ecosystem_type	0..1 String	direct
ecosystem_subtype	0..1 String	direct
specific_ecosystem	0..1 String	direct
mod_date	0..1 Datetime	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_gold

Mappings

Mapping Type	Mapped Value
self	img_gold:GoldStudy
native	img_gold:GoldStudy

LinkML Source

Direct

name: gold_study
from_schema: https://w3id.org/jgi/img_gold
attributes:
  study_id:
    name: study_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_analysis_project
    - gold_master_permission
    - gold_master_study
    - gold_study
    range: integer
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  study_name:
    name: study_name
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_master_study
    - gold_study
    range: string
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_sequencing_project
    - gold_study
    range: integer
    required: false
  contact_email:
    name: contact_email
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    domain_of:
    - gold_study
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false

Induced

name: gold_study
from_schema: https://w3id.org/jgi/img_gold
attributes:
  study_id:
    name: study_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: study_id
    owner: gold_study
    domain_of:
    - gold_master_analysis_project
    - gold_master_permission
    - gold_master_study
    - gold_study
    range: integer
    required: false
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/img_gold
    alias: gold_id
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    range: string
    required: false
  study_name:
    name: study_name
    from_schema: https://w3id.org/jgi/img_gold
    alias: study_name
    owner: gold_study
    domain_of:
    - gold_master_study
    - gold_study
    range: string
    required: false
  contact_oid:
    name: contact_oid
    from_schema: https://w3id.org/jgi/img_gold
    alias: contact_oid
    owner: gold_study
    domain_of:
    - gold_sequencing_project
    - gold_study
    range: integer
    required: false
  contact_email:
    name: contact_email
    from_schema: https://w3id.org/jgi/img_gold
    rank: 1000
    alias: contact_email
    owner: gold_study
    domain_of:
    - gold_study
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_category
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_type
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_gold
    alias: ecosystem_subtype
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_gold
    alias: specific_ecosystem
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_biosample
    - gold_master_organism
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: string
    required: false
  mod_date:
    name: mod_date
    from_schema: https://w3id.org/jgi/img_gold
    alias: mod_date
    owner: gold_study
    domain_of:
    - gold_analysis_project
    - gold_master_analysis_project
    - gold_master_project
    - gold_master_study
    - gold_sequencing_project
    - gold_study
    range: datetime
    required: false