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img_methylome

URI: https://w3id.org/jgi/img_methylome

Name: img_methylome

Classes

Class Description
MethExp
MethExperiment
MethExperimentExtLinks
MethExperimentPublications
MethFunctionCoverage
MethModification
MethMotif
MethMotifSummary
MethSample
MethStats

Slots

Slot Description
add_date
center_pos
chemistry_type
context
coverage
custom_url
db_name
description
end_coord
exp_contact
exp_date
exp_name
exp_oid
experiment
fraction
function_id
function_type
group_tag
id
img_scaffold_oid
img_taxon_oid
ipd_ratio
is_public
mean_coverage
mean_ipd_ratio
mean_score
methylation_coord
modification_count
modification_oid
modification_type
motif_oid
motif_string
motif_summ_oid
motif_summary
n_anticoding_mods
n_both_strand_mods
n_coding_mods
n_detected
n_genome
n_noncoding_mods
notes
objective_score
organism_name
partner_motif_string
phase
project_name
publications
refid
sample
sample_oid Foreign key to meth_sample
score
start_coord
strand
tool_name
type

Enumerations

Enumeration Description

Types

Type Description
Boolean A binary (true or false) value
Curie a compact URI
Date a date (year, month and day) in an idealized calendar
DateOrDatetime Either a date or a datetime
Datetime The combination of a date and time
Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double A real number that conforms to the xsd:double specification
Float A real number that conforms to the xsd:float specification
Integer An integer
Jsonpath A string encoding a JSON Path
Jsonpointer A string encoding a JSON Pointer
Ncname Prefix part of CURIE
Nodeidentifier A URI, CURIE or BNODE that represents a node in a model
Objectidentifier A URI or CURIE that represents an object in the model
Sparqlpath A string encoding a SPARQL Property Path
String A character string
Time A time object represents a (local) time of day, independent of any particular...
Uri a complete URI
Uriorcurie a URI or a CURIE

Subsets

Subset Description