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Class: MethExperiment

URI: img_methylome:MethExperiment

classDiagram class MethExperiment click MethExperiment href "../MethExperiment/" MethExperiment : add_date MethExperiment : chemistry_type MethExperiment : description MethExperiment : exp_contact MethExperiment : exp_date MethExperiment : exp_name MethExperiment : exp_oid MethExperiment : is_public MethExperiment : notes MethExperiment : project_name

Slots

Name Cardinality and Range Description Inheritance
exp_oid 0..1
Integer		 direct
project_name 0..1
String		 direct
exp_name 0..1
String		 direct
description 0..1
String		 direct
exp_date 0..1
String		 direct
exp_contact 0..1
String		 direct
add_date 0..1
Datetime		 direct
notes 0..1
String		 direct
is_public 0..1
String		 direct
chemistry_type 0..1
String		 direct

Usages

used by used in type used
MethExperimentExtLinks exp_oid range MethExperiment
MethExperimentPublications exp_oid range MethExperiment
MethFunctionCoverage exp_oid range MethExperiment
MethMotifSummary experiment range MethExperiment
MethSample experiment range MethExperiment
MethStats exp_oid range MethExperiment

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_methylome

Mappings

Mapping Type Mapped Value
self img_methylome:MethExperiment
native img_methylome:MethExperiment

LinkML Source

Direct

name: meth_experiment
from_schema: https://w3id.org/jgi/img_methylome
attributes:
  exp_oid:
    name: exp_oid
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_experiment_ext_links
    - meth_experiment_publications
    - meth_function_coverage
    - meth_stats
    range: integer
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  exp_name:
    name: exp_name
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_sample
    range: string
    required: false
  exp_date:
    name: exp_date
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  exp_contact:
    name: exp_contact
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: datetime
    required: false
  notes:
    name: notes
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  chemistry_type:
    name: chemistry_type
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false

Induced

name: meth_experiment
from_schema: https://w3id.org/jgi/img_methylome
attributes:
  exp_oid:
    name: exp_oid
    from_schema: https://w3id.org/jgi/img_methylome
    alias: exp_oid
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_experiment_ext_links
    - meth_experiment_publications
    - meth_function_coverage
    - meth_stats
    range: integer
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/img_methylome
    alias: project_name
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  exp_name:
    name: exp_name
    from_schema: https://w3id.org/jgi/img_methylome
    alias: exp_name
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_methylome
    alias: description
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_sample
    range: string
    required: false
  exp_date:
    name: exp_date
    from_schema: https://w3id.org/jgi/img_methylome
    alias: exp_date
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  exp_contact:
    name: exp_contact
    from_schema: https://w3id.org/jgi/img_methylome
    alias: exp_contact
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_methylome
    alias: add_date
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: datetime
    required: false
  notes:
    name: notes
    from_schema: https://w3id.org/jgi/img_methylome
    alias: notes
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_methylome
    alias: is_public
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false
  chemistry_type:
    name: chemistry_type
    from_schema: https://w3id.org/jgi/img_methylome
    alias: chemistry_type
    owner: meth_experiment
    domain_of:
    - meth_exp
    - meth_experiment
    range: string
    required: false