Class: MethStats

URI: img_methylome:MethStats

classDiagram class MethStats click MethStats href "../MethStats/" MethStats : exp_oid MethStats --> "0..1" MethExperiment : exp_oid click MethExperiment href "../MethExperiment/" MethStats : n_anticoding_mods MethStats : n_both_strand_mods MethStats : n_coding_mods MethStats : n_noncoding_mods MethStats : sample_oid MethStats --> "0..1" MethSample : sample_oid click MethSample href "../MethSample/"

Slots

Name	Cardinality and Range	Description	Inheritance
exp_oid	0..1 MethExperiment	Foreign key to meth_experiment	direct
sample_oid	0..1 MethSample	Foreign key to meth_sample	direct
n_coding_mods	0..1 Float		direct
n_anticoding_mods	0..1 Float		direct
n_noncoding_mods	0..1 Float		direct
n_both_strand_mods	0..1 Float		direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_methylome

Mappings

Mapping Type	Mapped Value
self	img_methylome:MethStats
native	img_methylome:MethStats

LinkML Source

Direct

name: meth_stats
from_schema: https://w3id.org/jgi/img_methylome
attributes:
  exp_oid:
    name: exp_oid
    description: Foreign key to meth_experiment
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_experiment_ext_links
    - meth_experiment_publications
    - meth_function_coverage
    - meth_stats
    range: meth_experiment
    required: false
  sample_oid:
    name: sample_oid
    description: Foreign key to meth_sample
    from_schema: https://w3id.org/jgi/img_methylome
    domain_of:
    - meth_function_coverage
    - meth_sample
    - meth_stats
    range: meth_sample
    required: false
  n_coding_mods:
    name: n_coding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    domain_of:
    - meth_stats
    range: float
    required: false
  n_anticoding_mods:
    name: n_anticoding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    domain_of:
    - meth_stats
    range: float
    required: false
  n_noncoding_mods:
    name: n_noncoding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    domain_of:
    - meth_stats
    range: float
    required: false
  n_both_strand_mods:
    name: n_both_strand_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    domain_of:
    - meth_stats
    range: float
    required: false

Induced

name: meth_stats
from_schema: https://w3id.org/jgi/img_methylome
attributes:
  exp_oid:
    name: exp_oid
    description: Foreign key to meth_experiment
    from_schema: https://w3id.org/jgi/img_methylome
    alias: exp_oid
    owner: meth_stats
    domain_of:
    - meth_exp
    - meth_experiment
    - meth_experiment_ext_links
    - meth_experiment_publications
    - meth_function_coverage
    - meth_stats
    range: meth_experiment
    required: false
  sample_oid:
    name: sample_oid
    description: Foreign key to meth_sample
    from_schema: https://w3id.org/jgi/img_methylome
    alias: sample_oid
    owner: meth_stats
    domain_of:
    - meth_function_coverage
    - meth_sample
    - meth_stats
    range: meth_sample
    required: false
  n_coding_mods:
    name: n_coding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    alias: n_coding_mods
    owner: meth_stats
    domain_of:
    - meth_stats
    range: float
    required: false
  n_anticoding_mods:
    name: n_anticoding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    alias: n_anticoding_mods
    owner: meth_stats
    domain_of:
    - meth_stats
    range: float
    required: false
  n_noncoding_mods:
    name: n_noncoding_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    alias: n_noncoding_mods
    owner: meth_stats
    domain_of:
    - meth_stats
    range: float
    required: false
  n_both_strand_mods:
    name: n_both_strand_mods
    from_schema: https://w3id.org/jgi/img_methylome
    rank: 1000
    alias: n_both_strand_mods
    owner: meth_stats
    domain_of:
    - meth_stats
    range: float
    required: false