Class: Taxon

URI: img_mysql_img:Taxon

classDiagram class Taxon click Taxon href "../Taxon/" Taxon : ecosystem Taxon : ecosystem_category Taxon : ecosystem_subtype Taxon : ecosystem_type Taxon : genome_type Taxon : is_public Taxon : obsolete_flag Taxon : specific_ecosystem Taxon : taxon_display_name Taxon : taxon_oid

Slots

Name	Cardinality and Range	Inheritance
taxon_oid	0..1 Integer	direct
taxon_display_name	0..1 String	direct
genome_type	0..1 String	direct
is_public	0..1 String	direct
obsolete_flag	0..1 String	direct
ecosystem	0..1 String	direct
ecosystem_category	0..1 String	direct
ecosystem_type	0..1 String	direct
ecosystem_subtype	0..1 String	direct
specific_ecosystem	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_mysql_img

Mappings

Mapping Type	Mapped Value
self	img_mysql_img:Taxon
native	img_mysql_img:Taxon

LinkML Source

Direct

name: taxon
from_schema: https://w3id.org/jgi/img_mysql_img
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    - taxon_body_site
    - taxon_habitat
    - taxon_vrpr
    range: integer
    required: false
  taxon_display_name:
    name: taxon_display_name
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  genome_type:
    name: genome_type
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  obsolete_flag:
    name: obsolete_flag
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    domain_of:
    - taxon
    range: string
    required: false

Induced

name: taxon
from_schema: https://w3id.org/jgi/img_mysql_img
attributes:
  taxon_oid:
    name: taxon_oid
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: taxon_oid
    owner: taxon
    domain_of:
    - taxon
    - taxon_body_site
    - taxon_habitat
    - taxon_vrpr
    range: integer
    required: false
  taxon_display_name:
    name: taxon_display_name
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: taxon_display_name
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  genome_type:
    name: genome_type
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: genome_type
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  is_public:
    name: is_public
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: is_public
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  obsolete_flag:
    name: obsolete_flag
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: obsolete_flag
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: ecosystem
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: ecosystem_category
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: ecosystem_type
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: ecosystem_subtype
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/img_mysql_img
    rank: 1000
    alias: specific_ecosystem
    owner: taxon
    domain_of:
    - taxon
    range: string
    required: false