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Class: MsSample

URI: img_proteome:MsSample

classDiagram class MsSample click MsSample href "../MsSample/" MsSample : description MsSample : experiment MsSample --> "0..1" MsExperiment : experiment click MsExperiment href "../MsExperiment/" MsSample : img_taxon_oid MsSample : ncbi_taxon_id MsSample : organism_name MsSample : sample_oid MsSample : sample_origin

Slots

Name Cardinality and Range Description Inheritance
sample_oid 0..1
Integer		 direct
description 0..1
String		 direct
sample_origin 0..1
String		 direct
ncbi_taxon_id 0..1
Integer		 direct
organism_name 0..1
String		 direct
img_taxon_oid 0..1
Integer		 direct
experiment 0..1
MsExperiment		 Foreign key to ms_experiment direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_proteome

Mappings

Mapping Type Mapped Value
self img_proteome:MsSample
native img_proteome:MsSample

LinkML Source

Direct

name: ms_sample
from_schema: https://w3id.org/jgi/img_proteome
attributes:
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    domain_of:
    - ms_sample
    - ms_sample_ext_links
    - ms_sample_sop
    range: integer
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_proteome
    domain_of:
    - ms_experiment
    - ms_protein
    - ms_protein_old
    - ms_sample
    range: string
    required: false
  sample_origin:
    name: sample_origin
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    domain_of:
    - ms_sample
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    domain_of:
    - ms_sample
    range: integer
    required: false
  organism_name:
    name: organism_name
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    domain_of:
    - ms_sample
    range: string
    required: false
  img_taxon_oid:
    name: img_taxon_oid
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    domain_of:
    - ms_sample
    range: integer
    required: false
  experiment:
    name: experiment
    description: Foreign key to ms_experiment
    from_schema: https://w3id.org/jgi/img_proteome
    domain_of:
    - ms_peptide
    - ms_peptide_old
    - ms_protein
    - ms_protein_old
    - ms_sample
    range: ms_experiment
    required: false

Induced

name: ms_sample
from_schema: https://w3id.org/jgi/img_proteome
attributes:
  sample_oid:
    name: sample_oid
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    alias: sample_oid
    owner: ms_sample
    domain_of:
    - ms_sample
    - ms_sample_ext_links
    - ms_sample_sop
    range: integer
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_proteome
    alias: description
    owner: ms_sample
    domain_of:
    - ms_experiment
    - ms_protein
    - ms_protein_old
    - ms_sample
    range: string
    required: false
  sample_origin:
    name: sample_origin
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    alias: sample_origin
    owner: ms_sample
    domain_of:
    - ms_sample
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    alias: ncbi_taxon_id
    owner: ms_sample
    domain_of:
    - ms_sample
    range: integer
    required: false
  organism_name:
    name: organism_name
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    alias: organism_name
    owner: ms_sample
    domain_of:
    - ms_sample
    range: string
    required: false
  img_taxon_oid:
    name: img_taxon_oid
    from_schema: https://w3id.org/jgi/img_proteome
    rank: 1000
    alias: img_taxon_oid
    owner: ms_sample
    domain_of:
    - ms_sample
    range: integer
    required: false
  experiment:
    name: experiment
    description: Foreign key to ms_experiment
    from_schema: https://w3id.org/jgi/img_proteome
    alias: experiment
    owner: ms_sample
    domain_of:
    - ms_peptide
    - ms_peptide_old
    - ms_protein
    - ms_protein_old
    - ms_sample
    range: ms_experiment
    required: false