Class: RnaseqDatasetStats

URI: img_rnaseq:RnaseqDatasetStats

classDiagram class RnaseqDatasetStats click RnaseqDatasetStats href "../RnaseqDatasetStats/" RnaseqDatasetStats : avg_reads_count RnaseqDatasetStats : dataset_oid RnaseqDatasetStats --> "0..1" RnaseqDataset : dataset_oid click RnaseqDataset href "../RnaseqDataset/" RnaseqDatasetStats : gene_count RnaseqDatasetStats : total_reads_count

Slots

Name	Cardinality and Range	Description	Inheritance
dataset_oid	0..1 RnaseqDataset	Foreign key to rnaseq_dataset	direct
gene_count	0..1 Float		direct
total_reads_count	0..1 Float		direct
avg_reads_count	0..1 Float		direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_rnaseq

Mappings

Mapping Type	Mapped Value
self	img_rnaseq:RnaseqDatasetStats
native	img_rnaseq:RnaseqDatasetStats

LinkML Source

Direct

name: rnaseq_dataset_stats
from_schema: https://w3id.org/jgi/img_rnaseq
attributes:
  dataset_oid:
    name: dataset_oid
    description: Foreign key to rnaseq_dataset
    from_schema: https://w3id.org/jgi/img_rnaseq
    domain_of:
    - rnaseq_dataset
    - rnaseq_dataset_stats
    - rnaseq_sample
    range: rnaseq_dataset
    required: false
  gene_count:
    name: gene_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    domain_of:
    - rnaseq_dataset_stats
    - rnaseq_experiment_stats
    range: float
    required: false
  total_reads_count:
    name: total_reads_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    domain_of:
    - rnaseq_dataset_stats
    range: float
    required: false
  avg_reads_count:
    name: avg_reads_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    domain_of:
    - rnaseq_dataset_stats
    range: float
    required: false

Induced

name: rnaseq_dataset_stats
from_schema: https://w3id.org/jgi/img_rnaseq
attributes:
  dataset_oid:
    name: dataset_oid
    description: Foreign key to rnaseq_dataset
    from_schema: https://w3id.org/jgi/img_rnaseq
    alias: dataset_oid
    owner: rnaseq_dataset_stats
    domain_of:
    - rnaseq_dataset
    - rnaseq_dataset_stats
    - rnaseq_sample
    range: rnaseq_dataset
    required: false
  gene_count:
    name: gene_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    alias: gene_count
    owner: rnaseq_dataset_stats
    domain_of:
    - rnaseq_dataset_stats
    - rnaseq_experiment_stats
    range: float
    required: false
  total_reads_count:
    name: total_reads_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    alias: total_reads_count
    owner: rnaseq_dataset_stats
    domain_of:
    - rnaseq_dataset_stats
    range: float
    required: false
  avg_reads_count:
    name: avg_reads_count
    from_schema: https://w3id.org/jgi/img_rnaseq
    rank: 1000
    alias: avg_reads_count
    owner: rnaseq_dataset_stats
    domain_of:
    - rnaseq_dataset_stats
    range: float
    required: false