Class: BiocycEnzrxn

URI: img_sat_v450:BiocycEnzrxn

classDiagram class BiocycEnzrxn click BiocycEnzrxn href "../BiocycEnzrxn/" BiocycEnzrxn : assign_basis BiocycEnzrxn : biocyc_enzyme BiocycEnzrxn --> "0..1" BiocycProtein : biocyc_enzyme click BiocycProtein href "../BiocycProtein/" BiocycEnzrxn : comments BiocycEnzrxn : common_name BiocycEnzrxn : reaction BiocycEnzrxn --> "0..1" BiocycReaction : reaction click BiocycReaction href "../BiocycReaction/" BiocycEnzrxn : rxn_direction BiocycEnzrxn : unique_id

Slots

Name	Cardinality and Range	Description	Inheritance
unique_id	0..1 String		direct
biocyc_enzyme	0..1 BiocycProtein	Foreign key to biocyc_protein	direct
common_name	0..1 String		direct
assign_basis	0..1 String		direct
reaction	0..1 BiocycReaction	Foreign key to biocyc_reaction	direct
rxn_direction	0..1 String		direct
comments	0..1 String		direct

Usages

used by	used in	type	used
BiocycEnzrxnExtLinks	unique_id	range	BiocycEnzrxn
BiocycEnzrxnProsthGroups	unique_id	range	BiocycEnzrxn
BiocycEnzrxnSynonyms	unique_id	range	BiocycEnzrxn
BiocycProteinCatalyzes	enzrxn	range	BiocycEnzrxn

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type	Mapped Value
self	img_sat_v450:BiocycEnzrxn
native	img_sat_v450:BiocycEnzrxn

LinkML Source

Direct

name: biocyc_enzrxn
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  unique_id:
    name: unique_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: string
    required: false
  biocyc_enzyme:
    name: biocyc_enzyme
    description: Foreign key to biocyc_protein
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_enzrxn
    range: biocyc_protein
    required: false
  common_name:
    name: common_name
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway
    - biocyc_protein
    - biocyc_reaction
    - compound
    range: string
    required: false
  assign_basis:
    name: assign_basis
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_enzrxn
    range: string
    required: false
  reaction:
    name: reaction
    description: Foreign key to biocyc_reaction
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_enzrxn
    range: biocyc_reaction
    required: false
  rxn_direction:
    name: rxn_direction
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_enzrxn
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway_comments
    - biocyc_protein
    - biocyc_reaction
    - enzyme
    - enzyme_transferred
    - go_term
    - pfam_clan
    - pfam_dead
    - pfam_family
    - reaction
    range: string
    required: false

Induced

name: biocyc_enzrxn
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  unique_id:
    name: unique_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: unique_id
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: string
    required: false
  biocyc_enzyme:
    name: biocyc_enzyme
    description: Foreign key to biocyc_protein
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: biocyc_enzyme
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_enzrxn
    range: biocyc_protein
    required: false
  common_name:
    name: common_name
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: common_name
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway
    - biocyc_protein
    - biocyc_reaction
    - compound
    range: string
    required: false
  assign_basis:
    name: assign_basis
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: assign_basis
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_enzrxn
    range: string
    required: false
  reaction:
    name: reaction
    description: Foreign key to biocyc_reaction
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: reaction
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_enzrxn
    range: biocyc_reaction
    required: false
  rxn_direction:
    name: rxn_direction
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: rxn_direction
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_enzrxn
    range: string
    required: false
  comments:
    name: comments
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: comments
    owner: biocyc_enzrxn
    domain_of:
    - biocyc_class
    - biocyc_comp
    - biocyc_enzrxn
    - biocyc_pathway_comments
    - biocyc_protein
    - biocyc_reaction
    - enzyme
    - enzyme_transferred
    - go_term
    - pfam_clan
    - pfam_dead
    - pfam_family
    - reaction
    range: string
    required: false