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Class: BiocycProteinCatalyzes

URI: img_sat_v450:BiocycProteinCatalyzes

classDiagram class BiocycProteinCatalyzes click BiocycProteinCatalyzes href "../BiocycProteinCatalyzes/" BiocycProteinCatalyzes : ec_number BiocycProteinCatalyzes : enzrxn BiocycProteinCatalyzes --> "0..1" BiocycEnzrxn : enzrxn click BiocycEnzrxn href "../BiocycEnzrxn/" BiocycProteinCatalyzes : unique_id BiocycProteinCatalyzes --> "0..1" BiocycProtein : unique_id click BiocycProtein href "../BiocycProtein/"

Slots

Name Cardinality and Range Description Inheritance
unique_id 0..1
BiocycProtein		 Foreign key to biocyc_protein direct
enzrxn 0..1
BiocycEnzrxn		 Foreign key to biocyc_enzrxn direct
ec_number 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type Mapped Value
self img_sat_v450:BiocycProteinCatalyzes
native img_sat_v450:BiocycProteinCatalyzes

LinkML Source

Direct

name: biocyc_protein_catalyzes
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  unique_id:
    name: unique_id
    description: Foreign key to biocyc_protein
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: biocyc_protein
    required: false
  enzrxn:
    name: enzrxn
    description: Foreign key to biocyc_enzrxn
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_protein_catalyzes
    range: biocyc_enzrxn
    required: false
  ec_number:
    name: ec_number
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - biocyc_protein_catalyzes
    - biocyc_reaction
    - enzyme
    - enzyme_enz_aliases
    - enzyme_ext_links
    - enzyme_products
    - enzyme_substrates
    - enzyme_transferred
    - ko2ec
    range: string
    required: false

Induced

name: biocyc_protein_catalyzes
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  unique_id:
    name: unique_id
    description: Foreign key to biocyc_protein
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: unique_id
    owner: biocyc_protein_catalyzes
    domain_of:
    - biocyc_class
    - biocyc_class_parents
    - biocyc_class_synonyms
    - biocyc_class_types
    - biocyc_comp
    - biocyc_comp_ext_links
    - biocyc_comp_synonyms
    - biocyc_comp_types
    - biocyc_enzrxn
    - biocyc_enzrxn_ext_links
    - biocyc_enzrxn_prosth_groups
    - biocyc_enzrxn_synonyms
    - biocyc_pathway
    - biocyc_pathway_comments
    - biocyc_pathway_ext_links
    - biocyc_pathway_in_species
    - biocyc_pathway_pwy_links
    - biocyc_pathway_sub_pwys
    - biocyc_pathway_super_pwys
    - biocyc_pathway_taxon_range
    - biocyc_pathway_types
    - biocyc_protein
    - biocyc_protein_catalyzes
    - biocyc_protein_ext_links
    - biocyc_protein_in_species
    - biocyc_protein_synonyms
    - biocyc_protein_types
    - biocyc_reaction
    - biocyc_reaction_ext_links
    - biocyc_reaction_in_pwys
    - biocyc_reaction_left_hand
    - biocyc_reaction_right_hand
    - biocyc_reaction_synonyms
    - biocyc_reaction_types
    range: biocyc_protein
    required: false
  enzrxn:
    name: enzrxn
    description: Foreign key to biocyc_enzrxn
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: enzrxn
    owner: biocyc_protein_catalyzes
    domain_of:
    - biocyc_protein_catalyzes
    range: biocyc_enzrxn
    required: false
  ec_number:
    name: ec_number
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: ec_number
    owner: biocyc_protein_catalyzes
    domain_of:
    - biocyc_protein_catalyzes
    - biocyc_reaction
    - enzyme
    - enzyme_enz_aliases
    - enzyme_ext_links
    - enzyme_products
    - enzyme_substrates
    - enzyme_transferred
    - ko2ec
    range: string
    required: false