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Class: GenomeProperty

URI: img_sat_v450:GenomeProperty

classDiagram class GenomeProperty click GenomeProperty href "../GenomeProperty/" GenomeProperty : add_date GenomeProperty : description GenomeProperty : name GenomeProperty : prop_accession GenomeProperty : threshold GenomeProperty : type

Slots

Name Cardinality and Range Description Inheritance
prop_accession 0..1
String		 direct
name 0..1
String		 direct
description 0..1
String		 direct
threshold 0..1
Integer		 direct
type 0..1
String		 direct
add_date 0..1
Datetime		 direct

Usages

used by used in type used
GenomePropertyParents prop_accession range GenomeProperty
GenomePropertyParents parents range GenomeProperty
PfamFamilyGenomeProperties property range GenomeProperty
PropertyStep GenomeProperty range GenomeProperty
TigrfamGenomeProperties property range GenomeProperty

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type Mapped Value
self img_sat_v450:GenomeProperty
native img_sat_v450:GenomeProperty

LinkML Source

Direct

name: genome_property
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  prop_accession:
    name: prop_accession
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - genome_property
    - genome_property_parents
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - cog2014
    - cogfunc2014
    - db_source
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - cog
    - genome_property
    - kegg_pathway
    - kog
    - pfam_clan
    - pfam_family
    - yesnocv
    range: string
    required: false
  threshold:
    name: threshold
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - genome_property
    range: integer
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - eggnog_hierarchy
    - eggnog_md52id2ont
    - genome_property
    - interpro
    - mpw_pgl_reaction_compounds
    - pfam_family
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - mpw_pgl_pathway
    - pfam_clan
    - pfam_family
    - property_step
    - reaction
    - tigr_role
    - tigrfam
    range: datetime
    required: false

Induced

name: genome_property
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  prop_accession:
    name: prop_accession
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: prop_accession
    owner: genome_property
    domain_of:
    - genome_property
    - genome_property_parents
    range: string
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: name
    owner: genome_property
    domain_of:
    - cog2014
    - cogfunc2014
    - db_source
    - genome_property
    - interpro
    - pfam_clan
    - pfam_dead
    - pfam_family
    - property_step
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: description
    owner: genome_property
    domain_of:
    - cog
    - genome_property
    - kegg_pathway
    - kog
    - pfam_clan
    - pfam_family
    - yesnocv
    range: string
    required: false
  threshold:
    name: threshold
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: threshold
    owner: genome_property
    domain_of:
    - genome_property
    range: integer
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: type
    owner: genome_property
    domain_of:
    - eggnog_hierarchy
    - eggnog_md52id2ont
    - genome_property
    - interpro
    - mpw_pgl_reaction_compounds
    - pfam_family
    range: string
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: add_date
    owner: genome_property
    domain_of:
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - mpw_pgl_pathway
    - pfam_clan
    - pfam_family
    - property_step
    - reaction
    - tigr_role
    - tigrfam
    range: datetime
    required: false