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Class: ImageRoi

URI: img_sat_v450:ImageRoi

classDiagram class ImageRoi click ImageRoi href "../ImageRoi/" ImageRoi : add_date ImageRoi : coord_string ImageRoi : height ImageRoi : pathway ImageRoi --> "0..1" KeggPathway : pathway click KeggPathway href "../KeggPathway/" ImageRoi : related_pathway ImageRoi --> "0..1" KeggPathway : related_pathway click KeggPathway href "../KeggPathway/" ImageRoi : roi_id ImageRoi : roi_label ImageRoi : roi_type ImageRoi : shape ImageRoi : width ImageRoi : x_coord ImageRoi : y_coord

Slots

Name Cardinality and Range Description Inheritance
roi_id 0..1
Integer		 direct
shape 0..1
String		 direct
roi_type 0..1
String		 direct
roi_label 0..1
String		 direct
x_coord 0..1
Integer		 direct
y_coord 0..1
Integer		 direct
height 0..1
Integer		 direct
width 0..1
Integer		 direct
pathway 0..1
KeggPathway		 Foreign key to kegg_pathway direct
add_date 0..1
Datetime		 direct
related_pathway 0..1
KeggPathway		 Foreign key to kegg_pathway direct
coord_string 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type Mapped Value
self img_sat_v450:ImageRoi
native img_sat_v450:ImageRoi

LinkML Source

Direct

name: image_roi
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  roi_id:
    name: roi_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - image_roi_compounds
    - image_roi_enzymes
    - image_roi_ko_terms
    - image_roi_reactions
    - km_image_roi
    - km_image_roi_ko_terms
    range: integer
    required: false
  shape:
    name: shape
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_type:
    name: roi_type
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_label:
    name: roi_label
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  x_coord:
    name: x_coord
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  y_coord:
    name: y_coord
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  height:
    name: height
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  width:
    name: width
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  pathway:
    name: pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - kegg_module
    range: kegg_pathway
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - mpw_pgl_pathway
    - pfam_clan
    - pfam_family
    - property_step
    - reaction
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  related_pathway:
    name: related_pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    range: kegg_pathway
    required: false
  coord_string:
    name: coord_string
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false

Induced

name: image_roi
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  roi_id:
    name: roi_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: roi_id
    owner: image_roi
    domain_of:
    - image_roi
    - image_roi_compounds
    - image_roi_enzymes
    - image_roi_ko_terms
    - image_roi_reactions
    - km_image_roi
    - km_image_roi_ko_terms
    range: integer
    required: false
  shape:
    name: shape
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: shape
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_type:
    name: roi_type
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: roi_type
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  roi_label:
    name: roi_label
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: roi_label
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false
  x_coord:
    name: x_coord
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: x_coord
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  y_coord:
    name: y_coord
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: y_coord
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  height:
    name: height
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: height
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  width:
    name: width
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: width
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: integer
    required: false
  pathway:
    name: pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: pathway
    owner: image_roi
    domain_of:
    - image_roi
    - kegg_module
    range: kegg_pathway
    required: false
  add_date:
    name: add_date
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: add_date
    owner: image_roi
    domain_of:
    - cog
    - cog_function
    - cog_species
    - compound
    - enzyme
    - enzyme_transferred
    - genome_property
    - go_graph_path
    - go_term
    - image_roi
    - kegg_pathway
    - km_image_roi
    - ko_term
    - kog
    - kog_function
    - mpw_pgl_pathway
    - pfam_clan
    - pfam_family
    - property_step
    - reaction
    - tigr_role
    - tigrfam
    range: datetime
    required: false
  related_pathway:
    name: related_pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: related_pathway
    owner: image_roi
    domain_of:
    - image_roi
    range: kegg_pathway
    required: false
  coord_string:
    name: coord_string
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: coord_string
    owner: image_roi
    domain_of:
    - image_roi
    - km_image_roi
    range: string
    required: false