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Class: KeggModule

URI: img_sat_v450:KeggModule

classDiagram class KeggModule click KeggModule href "../KeggModule/" KeggModule : definition KeggModule : image_id KeggModule : ko_pathway_id KeggModule : module_id KeggModule : module_name KeggModule : module_type KeggModule : pathway KeggModule --> "0..1" KeggPathway : pathway click KeggPathway href "../KeggPathway/"

Slots

Name Cardinality and Range Description Inheritance
module_id 0..1
String		 direct
module_name 0..1
String		 direct
module_type 0..1
String		 direct
definition 0..1
String		 direct
pathway 0..1
KeggPathway		 Foreign key to kegg_pathway direct
ko_pathway_id 0..1
String		 direct
image_id 0..1
String		 direct

Usages

used by used in type used
KeggModuleCompounds module_id range KeggModule
KeggModuleKoTerms module_id range KeggModule
KeggModuleReactions module_id range KeggModule
KeggPathwayModules modules range KeggModule

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type Mapped Value
self img_sat_v450:KeggModule
native img_sat_v450:KeggModule

LinkML Source

Direct

name: kegg_module
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  module_id:
    name: module_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - kegg_module
    - kegg_module_compounds
    - kegg_module_ko_terms
    - kegg_module_reactions
    - ko2module
    range: string
    required: false
  module_name:
    name: module_name
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - kegg_module
    range: string
    required: false
  module_type:
    name: module_type
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - kegg_module
    range: string
    required: false
  definition:
    name: definition
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - cog_function
    - go_term
    - kegg_module
    - ko_term
    - kog_function
    range: string
    required: false
  pathway:
    name: pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - image_roi
    - kegg_module
    range: kegg_pathway
    required: false
  ko_pathway_id:
    name: ko_pathway_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - kegg_module
    - kegg_pathway
    - ko_term_classes
    range: string
    required: false
  image_id:
    name: image_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - kegg_module
    - kegg_pathway
    - ko2pathway
    - ko_term_pathways
    range: string
    required: false

Induced

name: kegg_module
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  module_id:
    name: module_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: module_id
    owner: kegg_module
    domain_of:
    - kegg_module
    - kegg_module_compounds
    - kegg_module_ko_terms
    - kegg_module_reactions
    - ko2module
    range: string
    required: false
  module_name:
    name: module_name
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: module_name
    owner: kegg_module
    domain_of:
    - kegg_module
    range: string
    required: false
  module_type:
    name: module_type
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: module_type
    owner: kegg_module
    domain_of:
    - kegg_module
    range: string
    required: false
  definition:
    name: definition
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: definition
    owner: kegg_module
    domain_of:
    - cog_function
    - go_term
    - kegg_module
    - ko_term
    - kog_function
    range: string
    required: false
  pathway:
    name: pathway
    description: Foreign key to kegg_pathway
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: pathway
    owner: kegg_module
    domain_of:
    - image_roi
    - kegg_module
    range: kegg_pathway
    required: false
  ko_pathway_id:
    name: ko_pathway_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: ko_pathway_id
    owner: kegg_module
    domain_of:
    - kegg_module
    - kegg_pathway
    - ko_term_classes
    range: string
    required: false
  image_id:
    name: image_id
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: image_id
    owner: kegg_module
    domain_of:
    - kegg_module
    - kegg_pathway
    - ko2pathway
    - ko_term_pathways
    range: string
    required: false