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Class: MpwPglPathwayReaction

URI: img_sat_v450:MpwPglPathwayReaction

classDiagram class MpwPglPathwayReaction click MpwPglPathwayReaction href "../MpwPglPathwayReaction/" MpwPglPathwayReaction : cofactor MpwPglPathwayReaction : gene_group MpwPglPathwayReaction : pathway_oid MpwPglPathwayReaction : protein_group MpwPglPathwayReaction : reaction_label MpwPglPathwayReaction : reaction_oid MpwPglPathwayReaction : reaction_order MpwPglPathwayReaction : requaired_condition

Slots

Name Cardinality and Range Description Inheritance
pathway_oid 0..1
Integer		 direct
reaction_oid 0..1
Integer		 direct
reaction_order 0..1
String		 direct
reaction_label 0..1
String		 direct
cofactor 0..1
String		 direct
requaired_condition 0..1
String		 direct
protein_group 0..1
Integer		 direct
gene_group 0..1
Integer		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/img_sat_v450

Mappings

Mapping Type Mapped Value
self img_sat_v450:MpwPglPathwayReaction
native img_sat_v450:MpwPglPathwayReaction

LinkML Source

Direct

name: mpw_pgl_pathway_reaction
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  pathway_oid:
    name: pathway_oid
    from_schema: https://w3id.org/jgi/img_sat_v450
    domain_of:
    - kegg_pathway
    - kegg_pathway_modules
    - kegg_pathway_related_pathways
    - ko_term_pathways
    - mpw_pgl_pathway
    - mpw_pgl_pathway_reaction
    range: integer
    required: false
  reaction_oid:
    name: reaction_oid
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    - mpw_pgl_reaction
    - mpw_pgl_reaction_compounds
    range: integer
    required: false
  reaction_order:
    name: reaction_order
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  reaction_label:
    name: reaction_label
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  cofactor:
    name: cofactor
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  requaired_condition:
    name: requaired_condition
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  protein_group:
    name: protein_group
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: integer
    required: false
  gene_group:
    name: gene_group
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    domain_of:
    - mpw_pgl_pathway_reaction
    range: integer
    required: false

Induced

name: mpw_pgl_pathway_reaction
from_schema: https://w3id.org/jgi/img_sat_v450
attributes:
  pathway_oid:
    name: pathway_oid
    from_schema: https://w3id.org/jgi/img_sat_v450
    alias: pathway_oid
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - kegg_pathway
    - kegg_pathway_modules
    - kegg_pathway_related_pathways
    - ko_term_pathways
    - mpw_pgl_pathway
    - mpw_pgl_pathway_reaction
    range: integer
    required: false
  reaction_oid:
    name: reaction_oid
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: reaction_oid
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    - mpw_pgl_reaction
    - mpw_pgl_reaction_compounds
    range: integer
    required: false
  reaction_order:
    name: reaction_order
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: reaction_order
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  reaction_label:
    name: reaction_label
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: reaction_label
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  cofactor:
    name: cofactor
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: cofactor
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  requaired_condition:
    name: requaired_condition
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: requaired_condition
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: string
    required: false
  protein_group:
    name: protein_group
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: protein_group
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: integer
    required: false
  gene_group:
    name: gene_group
    from_schema: https://w3id.org/jgi/img_sat_v450
    rank: 1000
    alias: gene_group
    owner: mpw_pgl_pathway_reaction
    domain_of:
    - mpw_pgl_pathway_reaction
    range: integer
    required: false