Class: SubmissionProcStats

URI: img_sub:SubmissionProcStats

classDiagram class SubmissionProcStats click SubmissionProcStats href "../SubmissionProcStats/" SubmissionProcStats : avg_seq SubmissionProcStats : description SubmissionProcStats : longest_seq SubmissionProcStats : median_seq SubmissionProcStats : no_pred_features SubmissionProcStats : picture_file SubmissionProcStats : shortest_seq SubmissionProcStats : standard_dev SubmissionProcStats : step SubmissionProcStats : submission_id SubmissionProcStats : total_bases SubmissionProcStats : total_seq SubmissionProcStats : type_of_feature

Slots

Name	Cardinality and Range	Inheritance
submission_id	0..1 Integer	direct
step	0..1 String	direct
description	0..1 String	direct
total_seq	0..1 Integer	direct
total_bases	0..1 Integer	direct
shortest_seq	0..1 Integer	direct
longest_seq	0..1 Integer	direct
avg_seq	0..1 Integer	direct
median_seq	0..1 Integer	direct
standard_dev	0..1 Integer	direct
picture_file	0..1 String	direct
type_of_feature	0..1 String	direct
no_pred_features	0..1 Integer	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/img_sub

Mappings

Mapping Type	Mapped Value
self	img_sub:SubmissionProcStats
native	img_sub:SubmissionProcStats

LinkML Source

Direct

name: submission_proc_stats
from_schema: https://w3id.org/jgi/img_sub
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/img_sub
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - merfs_aggregate_file_size
    - rnaseq_notify
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    range: integer
    required: false
  step:
    name: step
    from_schema: https://w3id.org/jgi/img_sub
    domain_of:
    - annotation_step_stats
    - submission_proc_stats
    - submission_proc_steps
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_sub
    domain_of:
    - img_group_news
    - mygene
    - not_to_release
    - submission_proc_stats
    range: string
    required: false
  total_seq:
    name: total_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  total_bases:
    name: total_bases
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  shortest_seq:
    name: shortest_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  longest_seq:
    name: longest_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  avg_seq:
    name: avg_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  median_seq:
    name: median_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  standard_dev:
    name: standard_dev
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  picture_file:
    name: picture_file
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  type_of_feature:
    name: type_of_feature
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  no_pred_features:
    name: no_pred_features
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    domain_of:
    - submission_proc_stats
    range: integer
    required: false

Induced

name: submission_proc_stats
from_schema: https://w3id.org/jgi/img_sub
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/img_sub
    alias: submission_id
    owner: submission_proc_stats
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - merfs_aggregate_file_size
    - rnaseq_notify
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    range: integer
    required: false
  step:
    name: step
    from_schema: https://w3id.org/jgi/img_sub
    alias: step
    owner: submission_proc_stats
    domain_of:
    - annotation_step_stats
    - submission_proc_stats
    - submission_proc_steps
    range: string
    required: false
  description:
    name: description
    from_schema: https://w3id.org/jgi/img_sub
    alias: description
    owner: submission_proc_stats
    domain_of:
    - img_group_news
    - mygene
    - not_to_release
    - submission_proc_stats
    range: string
    required: false
  total_seq:
    name: total_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: total_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  total_bases:
    name: total_bases
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: total_bases
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  shortest_seq:
    name: shortest_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: shortest_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  longest_seq:
    name: longest_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: longest_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  avg_seq:
    name: avg_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: avg_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  median_seq:
    name: median_seq
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: median_seq
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  standard_dev:
    name: standard_dev
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: standard_dev
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false
  picture_file:
    name: picture_file
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: picture_file
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  type_of_feature:
    name: type_of_feature
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: type_of_feature
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: string
    required: false
  no_pred_features:
    name: no_pred_features
    from_schema: https://w3id.org/jgi/img_sub
    rank: 1000
    alias: no_pred_features
    owner: submission_proc_stats
    domain_of:
    - submission_proc_stats
    range: integer
    required: false