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Class: AnnotationJobStats

URI: imgsg_dev:AnnotationJobStats

classDiagram class AnnotationJobStats click AnnotationJobStats href "../AnnotationJobStats/" AnnotationJobStats : alloc_cpus AnnotationJobStats : elapsed_time AnnotationJobStats : end_time AnnotationJobStats : job_id AnnotationJobStats : job_state AnnotationJobStats : start_time AnnotationJobStats : submission_id AnnotationJobStats : submit_time

Slots

Name Cardinality and Range Description Inheritance
submission_id 0..1
Integer		 direct
job_id 0..1
String		 direct
submit_time 0..1
Datetime		 direct
start_time 0..1
Datetime		 direct
end_time 0..1
Datetime		 direct
elapsed_time 0..1
String		 direct
alloc_cpus 0..1
Integer		 direct
job_state 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:AnnotationJobStats
native imgsg_dev:AnnotationJobStats

LinkML Source

Direct

name: annotation_job_stats
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  job_id:
    name: job_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - annotation_job_sbatch_args
    - annotation_job_stats
    range: string
    required: false
  submit_time:
    name: submit_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  start_time:
    name: start_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  end_time:
    name: end_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  elapsed_time:
    name: elapsed_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: string
    required: false
  alloc_cpus:
    name: alloc_cpus
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: integer
    required: false
  job_state:
    name: job_state
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - annotation_job_stats
    range: string
    required: false

Induced

name: annotation_job_stats
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  submission_id:
    name: submission_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: submission_id
    owner: annotation_job_stats
    domain_of:
    - annotation_contigs_proteins_counts
    - annotation_job_sbatch_args
    - annotation_job_stats
    - annotation_step_stats
    - bad_depth_file_warnings
    - bioproject_propagation
    - gold_analysis_project
    - mer_submissions_queue
    - merfs_aggregate_file_size
    - phajek_test
    - pig_tracks
    - project_info_bioproject
    - project_info_biosample
    - project_info_genbank
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    - submission_data_files
    - submission_data_files_dmpath
    - submission_history
    - submission_img_contacts
    - submission_proc_stats
    - submission_proc_steps
    - submission_reads_file
    - submission_samples
    - t1_audit
    - v5_ap_imperfect_view
    range: integer
    required: false
  job_id:
    name: job_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: job_id
    owner: annotation_job_stats
    domain_of:
    - annotation_job_sbatch_args
    - annotation_job_stats
    range: string
    required: false
  submit_time:
    name: submit_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: submit_time
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  start_time:
    name: start_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: start_time
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  end_time:
    name: end_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: end_time
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: datetime
    required: false
  elapsed_time:
    name: elapsed_time
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: elapsed_time
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: string
    required: false
  alloc_cpus:
    name: alloc_cpus
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: alloc_cpus
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: integer
    required: false
  job_state:
    name: job_state
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: job_state
    owner: annotation_job_stats
    domain_of:
    - annotation_job_stats
    range: string
    required: false