Class: GenbankRefseqCrossover

URI: imgsg_dev:GenbankRefseqCrossover

classDiagram class GenbankRefseqCrossover click GenbankRefseqCrossover href "../GenbankRefseqCrossover/" GenbankRefseqCrossover : display_name GenbankRefseqCrossover : genbank_bioproject_accession GenbankRefseqCrossover : ncbi_taxon_id GenbankRefseqCrossover : project_oid GenbankRefseqCrossover : refseq_bioproject_accession

Slots

Name	Cardinality and Range	Inheritance
refseq_bioproject_accession	0..1 String	direct
genbank_bioproject_accession	0..1 String	direct
display_name	0..1 String	direct
ncbi_taxon_id	0..1 String	direct
project_oid	0..1 Integer	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:GenbankRefseqCrossover
native	imgsg_dev:GenbankRefseqCrossover

LinkML Source

Direct

name: genbank_refseq_crossover
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  refseq_bioproject_accession:
    name: refseq_bioproject_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - genbank_refseq_crossover
    range: string
    required: false
  genbank_bioproject_accession:
    name: genbank_bioproject_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - genbank_refseq_crossover
    range: string
    required: false
  display_name:
    name: display_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - genbank_refseq_crossover
    - gold_sequencing_project
    - organism_sort
    - pig_genbank_emailed_accs
    - pig_reruns
    - pig_retractions
    - pig_tracks
    - project_info
    - project_info_04112013
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - genbank_refseq_crossover
    - gold_sequencing_project
    - organism_sort
    - project_info
    - project_info_04112013
    - project_info_bioproject
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - bioproject_propagation
    - biosample
    - data_quality_flags
    - env_sample_soil_metadata
    - genbank_refseq_crossover
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - proj_info_cell_arrange_042014
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_body_products
    - project_info_body_sites
    - project_info_cell_arrangement
    - project_info_collaborators
    - project_info_cyano_metadata
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_diseases
    - project_info_energy_source
    - project_info_habitat
    - project_info_jgi_url
    - project_info_metabolism
    - project_info_natural_prods
    - project_info_nitrogen_fixation
    - project_info_nprods_metadata
    - project_info_phenotypes
    - project_info_project_relevance
    - project_info_seq_method
    - project_meta_updates
    - study_load
    - t_alex_test
    - t_all_gold_jgi_projects
    range: integer
    required: false

Induced

name: genbank_refseq_crossover
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  refseq_bioproject_accession:
    name: refseq_bioproject_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: refseq_bioproject_accession
    owner: genbank_refseq_crossover
    domain_of:
    - genbank_refseq_crossover
    range: string
    required: false
  genbank_bioproject_accession:
    name: genbank_bioproject_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: genbank_bioproject_accession
    owner: genbank_refseq_crossover
    domain_of:
    - genbank_refseq_crossover
    range: string
    required: false
  display_name:
    name: display_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: display_name
    owner: genbank_refseq_crossover
    domain_of:
    - genbank_refseq_crossover
    - gold_sequencing_project
    - organism_sort
    - pig_genbank_emailed_accs
    - pig_reruns
    - pig_retractions
    - pig_tracks
    - project_info
    - project_info_04112013
    range: string
    required: false
  ncbi_taxon_id:
    name: ncbi_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ncbi_taxon_id
    owner: genbank_refseq_crossover
    domain_of:
    - env_sample
    - genbank_refseq_crossover
    - gold_sequencing_project
    - organism_sort
    - project_info
    - project_info_04112013
    - project_info_bioproject
    range: string
    required: false
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: project_oid
    owner: genbank_refseq_crossover
    domain_of:
    - bioproject_propagation
    - biosample
    - data_quality_flags
    - env_sample_soil_metadata
    - genbank_refseq_crossover
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - proj_info_cell_arrange_042014
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_body_products
    - project_info_body_sites
    - project_info_cell_arrangement
    - project_info_collaborators
    - project_info_cyano_metadata
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_diseases
    - project_info_energy_source
    - project_info_habitat
    - project_info_jgi_url
    - project_info_metabolism
    - project_info_natural_prods
    - project_info_nitrogen_fixation
    - project_info_nprods_metadata
    - project_info_phenotypes
    - project_info_project_relevance
    - project_info_seq_method
    - project_meta_updates
    - study_load
    - t_alex_test
    - t_all_gold_jgi_projects
    range: integer
    required: false