Class: GoldAnalysisProjectGenbanks

URI: imgsg_dev:GoldAnalysisProjectGenbanks

classDiagram class GoldAnalysisProjectGenbanks click GoldAnalysisProjectGenbanks href "../GoldAnalysisProjectGenbanks/" GoldAnalysisProjectGenbanks : assembly_accession GoldAnalysisProjectGenbanks : genbank_id GoldAnalysisProjectGenbanks : gold_id GoldAnalysisProjectGenbanks : type

Slots

Name	Cardinality and Range	Inheritance
gold_id	0..1 String	direct
genbank_id	0..1 String	direct
assembly_accession	0..1 String	direct
type	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:GoldAnalysisProjectGenbanks
native	imgsg_dev:GoldAnalysisProjectGenbanks

LinkML Source

Direct

name: gold_analysis_project_genbanks
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  genbank_id:
    name: genbank_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - gold_analysis_project_genbanks
    - gold_ap_genbank
    - project_info_natural_prods
    - project_info_nprods_metadata
    - submission
    - x_project_info_np
    range: string
    required: false
  assembly_accession:
    name: assembly_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - gold_analysis_project_genbanks
    - gold_ap_genbank
    - load_genbank_prok_data
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - project_info
    range: string
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - announcement
    - gold_analysis_project_genbanks
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - workflow_stats
    range: string
    required: false

Induced

name: gold_analysis_project_genbanks
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gold_id
    owner: gold_analysis_project_genbanks
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  genbank_id:
    name: genbank_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: genbank_id
    owner: gold_analysis_project_genbanks
    domain_of:
    - gold_analysis_project_genbanks
    - gold_ap_genbank
    - project_info_natural_prods
    - project_info_nprods_metadata
    - submission
    - x_project_info_np
    range: string
    required: false
  assembly_accession:
    name: assembly_accession
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: assembly_accession
    owner: gold_analysis_project_genbanks
    domain_of:
    - gold_analysis_project_genbanks
    - gold_ap_genbank
    - load_genbank_prok_data
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - project_info
    range: string
    required: false
  type:
    name: type
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: type
    owner: gold_analysis_project_genbanks
    domain_of:
    - announcement
    - gold_analysis_project_genbanks
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - workflow_stats
    range: string
    required: false