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Class: GoldSpPhenotype

URI: imgsg_dev:GoldSpPhenotype

classDiagram class GoldSpPhenotype click GoldSpPhenotype href "../GoldSpPhenotype/" GoldSpPhenotype : gold_id GoldSpPhenotype --> "0..1" GoldSequencingProject : gold_id click GoldSequencingProject href "../GoldSequencingProject/" GoldSpPhenotype : phenotype

Slots

Name Cardinality and Range Description Inheritance
gold_id 0..1
GoldSequencingProject		 Foreign key to gold_sequencing_project direct
phenotype 0..1
String		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:GoldSpPhenotype
native imgsg_dev:GoldSpPhenotype

LinkML Source

Direct

name: gold_sp_phenotype
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: gold_sequencing_project
    required: false
  phenotype:
    name: phenotype
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - gold_sp_phenotype
    range: string
    required: false

Induced

name: gold_sp_phenotype
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gold_id
    owner: gold_sp_phenotype
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: gold_sequencing_project
    required: false
  phenotype:
    name: phenotype
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: phenotype
    owner: gold_sp_phenotype
    domain_of:
    - gold_sp_phenotype
    range: string
    required: false