Class: GoldSpSeqCenter

URI: imgsg_dev:GoldSpSeqCenter

classDiagram class GoldSpSeqCenter click GoldSpSeqCenter href "../GoldSpSeqCenter/" GoldSpSeqCenter : country GoldSpSeqCenter : gold_id GoldSpSeqCenter --> "0..1" GoldSequencingProject : gold_id click GoldSequencingProject href "../GoldSequencingProject/" GoldSpSeqCenter : name GoldSpSeqCenter : url

Slots

Name	Cardinality and Range	Description	Inheritance
gold_id	0..1 GoldSequencingProject	Foreign key to gold_sequencing_project	direct
name	0..1 String		direct
country	0..1 String		direct
url	0..1 String		direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:GoldSpSeqCenter
native	imgsg_dev:GoldSpSeqCenter

LinkML Source

Direct

name: gold_sp_seq_center
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: gold_sequencing_project
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - collaboratorcv
    - contact
    - gold_analysis_project_users
    - gold_sp_collaborator
    - gold_sp_seq_center
    - load_genbank_prok_data
    - luseq_center
    - request_account
    - seq_centercv
    - t_reddy_test
    range: string
    required: false
  country:
    name: country
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - contact
    - country_load
    - gold_sp_collaborator
    - gold_sp_seq_center
    - institutes
    - request_account
    - t_institutes_bak
    range: string
    required: false
  url:
    name: url
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample_data_links
    - env_sample_jgi_url
    - gold_sp_collaborator
    - gold_sp_seq_center
    - institutes
    - luseq_center
    - ora_aspnet_sitemap
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_jgi_url
    - t_institutes_bak
    range: string
    required: false

Induced

name: gold_sp_seq_center
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  gold_id:
    name: gold_id
    description: Foreign key to gold_sequencing_project
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: gold_id
    owner: gold_sp_seq_center
    domain_of:
    - analysis_project_permissions
    - env_sample
    - gold_analysis_project
    - gold_analysis_project_genbanks
    - gold_analysis_project_jgi_award_dois
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_analysis_project_sra_runs
    - gold_analysis_project_users
    - gold_ap_genbank_anomalous_reasons
    - gold_ap_publications
    - gold_sequencing_project
    - gold_sp_cell_arrangement
    - gold_sp_collaborator
    - gold_sp_disease
    - gold_sp_energy_source
    - gold_sp_genome_publications
    - gold_sp_habitat
    - gold_sp_metabolism
    - gold_sp_phenotype
    - gold_sp_relevance
    - gold_sp_seq_center
    - gold_sp_seq_method
    - gold_sp_sra
    - gold_sp_study_gold_id
    - gold_study
    - gold_study_info
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - study_load
    - v5_ap_imperfect_view
    - vsample
    range: gold_sequencing_project
    required: false
  name:
    name: name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: name
    owner: gold_sp_seq_center
    domain_of:
    - collaboratorcv
    - contact
    - gold_analysis_project_users
    - gold_sp_collaborator
    - gold_sp_seq_center
    - load_genbank_prok_data
    - luseq_center
    - request_account
    - seq_centercv
    - t_reddy_test
    range: string
    required: false
  country:
    name: country
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: country
    owner: gold_sp_seq_center
    domain_of:
    - contact
    - country_load
    - gold_sp_collaborator
    - gold_sp_seq_center
    - institutes
    - request_account
    - t_institutes_bak
    range: string
    required: false
  url:
    name: url
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: url
    owner: gold_sp_seq_center
    domain_of:
    - env_sample_data_links
    - env_sample_jgi_url
    - gold_sp_collaborator
    - gold_sp_seq_center
    - institutes
    - luseq_center
    - ora_aspnet_sitemap
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_jgi_url
    - t_institutes_bak
    range: string
    required: false