Class: Goldv5View

snapshot table for snapshot IMGSG_DEV.GOLDV5_VIEW

classDiagram class Goldv5View click Goldv5View href "../Goldv5View/" Goldv5View : analysis_project_id Goldv5View : analysis_project_type Goldv5View : ap_gold_id Goldv5View : biosample_gold_id Goldv5View : biosample_name Goldv5View : er_project_id Goldv5View : er_sample_id Goldv5View : img_taxon_id Goldv5View : its_annotation_at_id Goldv5View : its_spid Goldv5View : legacy_gold_id Goldv5View : pmo_project_id Goldv5View : project_name Goldv5View : seq_project_gold_id Goldv5View : study_gold_id Goldv5View : study_name

Slots

Name	Cardinality and Range	Inheritance
ap_gold_id	0..1 String	direct
analysis_project_id	0..1 Integer	direct
img_taxon_id	0..1 Integer	direct
its_annotation_at_id	0..1 Integer	direct
analysis_project_type	0..1 String	direct
seq_project_gold_id	0..1 String	direct
legacy_gold_id	0..1 String	direct
er_project_id	0..1 Integer	direct
er_sample_id	0..1 Integer	direct
its_spid	0..1 Integer	direct
pmo_project_id	0..1 Integer	direct
project_name	0..1 String	direct
biosample_gold_id	0..1 String	direct
biosample_name	0..1 String	direct
study_gold_id	0..1 String	direct
study_name	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:Goldv5View
native	imgsg_dev:Goldv5View

LinkML Source

Direct

name: goldv5_view
description: snapshot table for snapshot IMGSG_DEV.GOLDV5_VIEW
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  ap_gold_id:
    name: ap_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    range: string
    required: false
  analysis_project_id:
    name: analysis_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    range: integer
    required: false
  img_taxon_id:
    name: img_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    range: integer
    required: false
  its_annotation_at_id:
    name: its_annotation_at_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - gold_analysis_project
    - goldv5_view
    - v5_ap_imperfect_view
    range: integer
    required: false
  analysis_project_type:
    name: analysis_project_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    range: string
    required: false
  seq_project_gold_id:
    name: seq_project_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    range: string
    required: false
  legacy_gold_id:
    name: legacy_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - env_sample
    - gold_analysis_project_lookup
    - goldv5_view
    - project_info
    - study_load
    range: string
    required: false
  er_project_id:
    name: er_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    range: integer
    required: false
  er_sample_id:
    name: er_sample_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    - project_info
    - project_info_04112013
    range: integer
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - assembly
    - env_sample
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_sequencing_project
    - goldv5_view
    - project_info
    - project_info_04112013
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - t_all_gold_jgi_projects
    range: integer
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - assembly
    - env_sample
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_sequencing_project
    - goldv5_view
    - project_info
    - project_info_04112013
    range: integer
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - goldv5_view
    - project_info_bioproject
    - t_jgi_catalogue
    range: string
    required: false
  biosample_gold_id:
    name: biosample_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - gold_sequencing_project
    - goldv5_view
    range: string
    required: false
  biosample_name:
    name: biosample_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - biosample
    - env_sample
    - goldv5_view
    range: string
    required: false
  study_gold_id:
    name: study_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - gold_analysis_project
    - gold_sp_study_gold_id
    - goldv5_view
    - v5_ap_imperfect_view
    range: string
    required: false
  study_name:
    name: study_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - gold_study
    - goldv5_view
    - study
    - study_load
    range: string
    required: false

Induced

name: goldv5_view
description: snapshot table for snapshot IMGSG_DEV.GOLDV5_VIEW
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  ap_gold_id:
    name: ap_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: ap_gold_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    range: string
    required: false
  analysis_project_id:
    name: analysis_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: analysis_project_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - submission
    range: integer
    required: false
  img_taxon_id:
    name: img_taxon_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: img_taxon_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    range: integer
    required: false
  its_annotation_at_id:
    name: its_annotation_at_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: its_annotation_at_id
    owner: goldv5_view
    domain_of:
    - gold_analysis_project
    - goldv5_view
    - v5_ap_imperfect_view
    range: integer
    required: false
  analysis_project_type:
    name: analysis_project_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: analysis_project_type
    owner: goldv5_view
    domain_of:
    - goldv5_view
    range: string
    required: false
  seq_project_gold_id:
    name: seq_project_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: seq_project_gold_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    range: string
    required: false
  legacy_gold_id:
    name: legacy_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: legacy_gold_id
    owner: goldv5_view
    domain_of:
    - env_sample
    - gold_analysis_project_lookup
    - goldv5_view
    - project_info
    - study_load
    range: string
    required: false
  er_project_id:
    name: er_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: er_project_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    range: integer
    required: false
  er_sample_id:
    name: er_sample_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: er_sample_id
    owner: goldv5_view
    domain_of:
    - goldv5_view
    - project_info
    - project_info_04112013
    range: integer
    required: false
  its_spid:
    name: its_spid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: its_spid
    owner: goldv5_view
    domain_of:
    - assembly
    - env_sample
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_sequencing_project
    - goldv5_view
    - project_info
    - project_info_04112013
    - rnaseq_notify_phajek
    - rnaseq_notify_phajek_dev
    - t_all_gold_jgi_projects
    range: integer
    required: false
  pmo_project_id:
    name: pmo_project_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pmo_project_id
    owner: goldv5_view
    domain_of:
    - assembly
    - env_sample
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_sequencing_project
    - goldv5_view
    - project_info
    - project_info_04112013
    range: integer
    required: false
  project_name:
    name: project_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: project_name
    owner: goldv5_view
    domain_of:
    - goldv5_view
    - project_info_bioproject
    - t_jgi_catalogue
    range: string
    required: false
  biosample_gold_id:
    name: biosample_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: biosample_gold_id
    owner: goldv5_view
    domain_of:
    - gold_sequencing_project
    - goldv5_view
    range: string
    required: false
  biosample_name:
    name: biosample_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: biosample_name
    owner: goldv5_view
    domain_of:
    - biosample
    - env_sample
    - goldv5_view
    range: string
    required: false
  study_gold_id:
    name: study_gold_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: study_gold_id
    owner: goldv5_view
    domain_of:
    - gold_analysis_project
    - gold_sp_study_gold_id
    - goldv5_view
    - v5_ap_imperfect_view
    range: string
    required: false
  study_name:
    name: study_name
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: study_name
    owner: goldv5_view
    domain_of:
    - gold_study
    - goldv5_view
    - study
    - study_load
    range: string
    required: false