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Class: KbasePangenomeMembers

URI: imgsg_dev:KbasePangenomeMembers

classDiagram class KbasePangenomeMembers click KbasePangenomeMembers href "../KbasePangenomeMembers/" KbasePangenomeMembers : checkm_completeness KbasePangenomeMembers : checkm_contamination KbasePangenomeMembers : member_id KbasePangenomeMembers : new_completeness KbasePangenomeMembers : pangenome_id

Slots

Name Cardinality and Range Description Inheritance
pangenome_id 0..1
String		 direct
member_id 0..1
String		 direct
checkm_completeness 0..1
Float		 direct
checkm_contamination 0..1
Float		 direct
new_completeness 0..1
Float		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type Mapped Value
self imgsg_dev:KbasePangenomeMembers
native imgsg_dev:KbasePangenomeMembers

LinkML Source

Direct

name: kbase_pangenome_members
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  pangenome_id:
    name: pangenome_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - kbase_pangenome
    - kbase_pangenome_members
    range: string
    required: false
  member_id:
    name: member_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - kbase_pangenome_members
    range: string
    required: false
  checkm_completeness:
    name: checkm_completeness
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false
  checkm_contamination:
    name: checkm_contamination
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false
  new_completeness:
    name: new_completeness
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false

Induced

name: kbase_pangenome_members
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  pangenome_id:
    name: pangenome_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: pangenome_id
    owner: kbase_pangenome_members
    domain_of:
    - kbase_pangenome
    - kbase_pangenome_members
    range: string
    required: false
  member_id:
    name: member_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: member_id
    owner: kbase_pangenome_members
    domain_of:
    - kbase_pangenome_members
    range: string
    required: false
  checkm_completeness:
    name: checkm_completeness
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: checkm_completeness
    owner: kbase_pangenome_members
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false
  checkm_contamination:
    name: checkm_contamination
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: checkm_contamination
    owner: kbase_pangenome_members
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false
  new_completeness:
    name: new_completeness
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: new_completeness
    owner: kbase_pangenome_members
    domain_of:
    - kbase_pangenome_members
    range: float
    required: false