Class: MetagenomicClassification

URI: imgsg_dev:MetagenomicClassification

classDiagram class MetagenomicClassification click MetagenomicClassification href "../MetagenomicClassification/" MetagenomicClassification : ecosystem MetagenomicClassification : ecosystem_category MetagenomicClassification : ecosystem_subtype MetagenomicClassification : ecosystem_type MetagenomicClassification : mc_id MetagenomicClassification : specific_ecosystem

Slots

Name	Cardinality and Range	Inheritance
mc_id	0..1 Integer	direct
ecosystem	0..1 String	direct
ecosystem_category	0..1 String	direct
ecosystem_type	0..1 String	direct
ecosystem_subtype	0..1 String	direct
specific_ecosystem	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:MetagenomicClassification
native	imgsg_dev:MetagenomicClassification

LinkML Source

Direct

name: metagenomic_classification
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  mc_id:
    name: mc_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - metagenomic_classification
    range: integer
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_category
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_type
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvecosystem_subtype
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - cvspecific_ecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false

Induced

name: metagenomic_classification
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  mc_id:
    name: mc_id
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: mc_id
    owner: metagenomic_classification
    domain_of:
    - metagenomic_classification
    range: integer
    required: false
  ecosystem:
    name: ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem
    owner: metagenomic_classification
    domain_of:
    - cvecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_category:
    name: ecosystem_category
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_category
    owner: metagenomic_classification
    domain_of:
    - cvecosystem_category
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_type:
    name: ecosystem_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_type
    owner: metagenomic_classification
    domain_of:
    - cvecosystem_type
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  ecosystem_subtype:
    name: ecosystem_subtype
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: ecosystem_subtype
    owner: metagenomic_classification
    domain_of:
    - cvecosystem_subtype
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false
  specific_ecosystem:
    name: specific_ecosystem
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: specific_ecosystem
    owner: metagenomic_classification
    domain_of:
    - cvspecific_ecosystem
    - env_sample
    - gold_analysis_project
    - gold_sequencing_project
    - gold_study
    - metagenomic_class_nodes
    - metagenomic_class_nodes_new
    - metagenomic_class_nodes_new_bk
    - metagenomic_classification
    - project_info
    - project_info_04112013
    - v5_ap_imperfect_view
    - vsample
    range: string
    required: false