Class: ProjectInfo
URI: imgsg_dev:ProjectInfo
classDiagram
class ProjectInfo
click ProjectInfo href "../ProjectInfo/"
ProjectInfo : add_date
ProjectInfo : additional_body_sample_site
ProjectInfo : altitude
ProjectInfo : annotator_comments
ProjectInfo : assembly_accession
ProjectInfo : assembly_method
ProjectInfo : availability
ProjectInfo : bei_status
ProjectInfo : binning_method
ProjectInfo : bioproject_accession
ProjectInfo : bioproject_description
ProjectInfo : bioproject_name
ProjectInfo : bioproject_relevance
ProjectInfo : bioproject_title
ProjectInfo : biosafety_level
ProjectInfo : biosample_accession
ProjectInfo : biotic_rel
ProjectInfo : body_product
ProjectInfo : cell_diameter
ProjectInfo : cell_length
ProjectInfo : cell_shape
ProjectInfo : chromosome_count
ProjectInfo : clade
ProjectInfo : color
ProjectInfo : comments
ProjectInfo : commercial
ProjectInfo : commercial_comments
ProjectInfo : common_name
ProjectInfo : completion_date
ProjectInfo : contact_email
ProjectInfo : contact_name
ProjectInfo : contact_oid
ProjectInfo : contact_url
ProjectInfo : contig_count
ProjectInfo : coordinate_type
ProjectInfo : culture_collection
ProjectInfo : culture_type
ProjectInfo : cultured
ProjectInfo : current_finishing_status
ProjectInfo : dacc_display
ProjectInfo : depth
ProjectInfo : display_name
ProjectInfo : doi_id
ProjectInfo : domain
ProjectInfo : ecosystem
ProjectInfo : ecosystem_category
ProjectInfo : ecosystem_subtype
ProjectInfo : ecosystem_type
ProjectInfo : ecotype
ProjectInfo : er_sample_id
ProjectInfo : est_size
ProjectInfo : exemplar_doi_id
ProjectInfo : exemplar_name
ProjectInfo : finishing_goal
ProjectInfo : fk_study_id
ProjectInfo --> "0..1" Study : fk_study_id
click Study href "../Study/"
ProjectInfo : funding_program
ProjectInfo : gc_perc
ProjectInfo : gcat_id
ProjectInfo : genbank_low_quality_annotation
ProjectInfo : genbank_low_quality_genome
ProjectInfo : gene_calling_method
ProjectInfo : gene_count
ProjectInfo : genome_count
ProjectInfo : genus
ProjectInfo : genus_synonyms
ProjectInfo : geo_location
ProjectInfo : gold_id_old
ProjectInfo : gold_stamp_id
ProjectInfo : goldv5_project_id
ProjectInfo : gpts_bioclassification_name
ProjectInfo : gpts_comments
ProjectInfo : gpts_embargo_days
ProjectInfo : gpts_embargo_start_date
ProjectInfo : gpts_last_mod_date
ProjectInfo : gpts_ncbi_scientific_name
ProjectInfo : gpts_public_release_date
ProjectInfo : gram_stain
ProjectInfo : greengenes_id
ProjectInfo : growth_conditions
ProjectInfo : habitat_category
ProjectInfo : hmp_date_dna_received
ProjectInfo : hmp_dna_received
ProjectInfo : hmp_draft_seq_completion_date
ProjectInfo : hmp_id
ProjectInfo : hmp_iso_avail_comments
ProjectInfo : hmp_iso_comments
ProjectInfo : hmp_isolate_selection_source
ProjectInfo : hmp_isolation_bodysite
ProjectInfo : hmp_isolation_bodysubsite
ProjectInfo : hmp_project_comments
ProjectInfo : hmp_project_status
ProjectInfo : hmp_seq_begin_date
ProjectInfo : homd_id
ProjectInfo : host_age
ProjectInfo : host_comments
ProjectInfo : host_gender
ProjectInfo : host_health
ProjectInfo : host_medication
ProjectInfo : host_name
ProjectInfo : host_race
ProjectInfo : host_spec
ProjectInfo : host_taxon_id
ProjectInfo : id_16s
ProjectInfo : image_url
ProjectInfo : img_contact
ProjectInfo : img_exp_oid
ProjectInfo : img_oid
ProjectInfo : information_name
ProjectInfo : information_url
ProjectInfo : iso_comments
ProjectInfo : iso_country
ProjectInfo : iso_method
ProjectInfo : iso_pubmed_id
ProjectInfo : iso_source
ProjectInfo : iso_year
ProjectInfo : isolate_selected
ProjectInfo : isolation
ProjectInfo : its_proposal_id
ProjectInfo : its_spid
ProjectInfo : its_spid_old
ProjectInfo : jgi_dir_number
ProjectInfo : jgi_final_deliverable
ProjectInfo : jgi_funding_program
ProjectInfo : jgi_funding_year
ProjectInfo : jgi_product_name
ProjectInfo : jgi_project_type
ProjectInfo : jgi_proposal_id
ProjectInfo : jgi_sequencing_goal
ProjectInfo : jgi_status
ProjectInfo : jgi_visibility
ProjectInfo : known_non_hosts
ProjectInfo : latitude
ProjectInfo : legacy_gold_id
ProjectInfo : library_method
ProjectInfo : loc_coord
ProjectInfo : locus_tag
ProjectInfo : longhurst_code
ProjectInfo : longhurst_description
ProjectInfo : longitude
ProjectInfo : map_link_url
ProjectInfo : mod_date
ProjectInfo : modified_by
ProjectInfo : motility
ProjectInfo : ncbi_archive_id
ProjectInfo : ncbi_class
ProjectInfo : ncbi_family
ProjectInfo : ncbi_genus
ProjectInfo : ncbi_order
ProjectInfo : ncbi_phylum
ProjectInfo : ncbi_project_id
ProjectInfo : ncbi_project_name
ProjectInfo : ncbi_species
ProjectInfo : ncbi_submit_status
ProjectInfo : ncbi_superkingdom
ProjectInfo : ncbi_taxon_id
ProjectInfo : no_of_reads
ProjectInfo : nucleic_acid_type
ProjectInfo : organism_comments
ProjectInfo : organism_type
ProjectInfo : other_hosts
ProjectInfo : otu
ProjectInfo : oxygen_req
ProjectInfo : ph
ProjectInfo : phase
ProjectInfo : phase_status
ProjectInfo : phylogeny
ProjectInfo : plasmid_count
ProjectInfo : pmid
ProjectInfo : pmo_project_id
ProjectInfo : pressure
ProjectInfo : proj_desc
ProjectInfo : project_comments
ProjectInfo : project_goal
ProjectInfo : project_oid
ProjectInfo : project_status
ProjectInfo : project_type
ProjectInfo : project_web_page
ProjectInfo : proposal_name
ProjectInfo : proteomics_data
ProjectInfo : proteomics_link_url
ProjectInfo : pub_journal
ProjectInfo : pub_link
ProjectInfo : pub_vol
ProjectInfo : publication_date
ProjectInfo : refseq_ids
ProjectInfo : refseq_link_url
ProjectInfo : related_project_oid
ProjectInfo : reviewed
ProjectInfo : salinity
ProjectInfo : sample_oid
ProjectInfo : scaffold_count
ProjectInfo : scientific_program
ProjectInfo : scope_of_work
ProjectInfo : seq_center_proj_id
ProjectInfo : seq_country
ProjectInfo : seq_depth
ProjectInfo : seq_quality
ProjectInfo : seq_status
ProjectInfo : seq_status_link
ProjectInfo : serovar
ProjectInfo : short_read_archive_id
ProjectInfo : show_in_dacc
ProjectInfo : show_in_gold
ProjectInfo : singlet_count
ProjectInfo : species
ProjectInfo : species_synonyms
ProjectInfo : specific_ecosystem
ProjectInfo : sporulation
ProjectInfo : strain
ProjectInfo : strain_habitat
ProjectInfo : strain_info_id
ProjectInfo : submitters_project_name
ProjectInfo : subspecies
ProjectInfo : symbiont
ProjectInfo : symbiont_taxon_id
ProjectInfo : symbiotic_interaction
ProjectInfo : symbiotic_rel
ProjectInfo : taxon_doi_id
ProjectInfo : temp_optimum
ProjectInfo : temp_range
ProjectInfo : transcriptomics_data
ProjectInfo : transcriptomics_link_url
ProjectInfo : type_strain
ProjectInfo : uncultured_type
ProjectInfo : units
ProjectInfo : vector
ProjectInfo : viral_group
ProjectInfo : viral_subgroup
ProjectInfo : web_page_code
ProjectInfo : wiki_link_url
Slots
Usages
Schema Source
- from schema: https://w3id.org/jgi/imgsg_dev
Mappings
| Mapping Type |
Mapped Value |
| self |
imgsg_dev:ProjectInfo |
| native |
imgsg_dev:ProjectInfo |
LinkML Source
Direct
name: project_info
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
project_oid:
name: project_oid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- bioproject_propagation
- biosample
- data_quality_flags
- env_sample_soil_metadata
- genbank_refseq_crossover
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_img_nat_prod_entity
- ncbi_accessions
- ncbi_accessions_jbtest
- proj_info_cell_arrange_042014
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_body_products
- project_info_body_sites
- project_info_cell_arrangement
- project_info_collaborators
- project_info_cyano_metadata
- project_info_data_links
- project_info_data_links_112013
- project_info_diseases
- project_info_energy_source
- project_info_habitat
- project_info_jgi_url
- project_info_metabolism
- project_info_natural_prods
- project_info_nitrogen_fixation
- project_info_nprods_metadata
- project_info_phenotypes
- project_info_project_relevance
- project_info_seq_method
- project_meta_updates
- study_load
- t_alex_test
- t_all_gold_jgi_projects
range: integer
required: false
gold_stamp_id:
name: gold_stamp_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
- vsample
range: string
required: false
gold_id_old:
name: gold_id_old
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
display_name:
name: display_name
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- genbank_refseq_crossover
- gold_sequencing_project
- organism_sort
- pig_genbank_emailed_accs
- pig_reruns
- pig_retractions
- pig_tracks
- project_info
- project_info_04112013
range: string
required: false
common_name:
name: common_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
genus:
name: genus
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
genus_synonyms:
name: genus_synonyms
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
species:
name: species
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
species_synonyms:
name: species_synonyms
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
strain:
name: strain
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- project_info_biosample
range: string
required: false
serovar:
name: serovar
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
phylogeny:
name: phylogeny
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
ncbi_taxon_id:
name: ncbi_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- genbank_refseq_crossover
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- project_info_bioproject
range: string
required: false
ncbi_superkingdom:
name: ncbi_superkingdom
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- project_info
- project_info_04112013
range: string
required: false
domain:
name: domain
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_phylum:
name: ncbi_phylum
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_class:
name: ncbi_class
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_order:
name: ncbi_order
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_family:
name: ncbi_family
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_genus:
name: ncbi_genus
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_species:
name: ncbi_species
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
culture_collection:
name: culture_collection
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_project_id:
name: ncbi_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- study_load
- vsample
range: integer
required: false
symbiont:
name: symbiont
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
symbiont_taxon_id:
name: symbiont_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
isolation:
name: isolation
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
oxygen_req:
name: oxygen_req
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
cell_shape:
name: cell_shape
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
motility:
name: motility
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
sporulation:
name: sporulation
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
temp_range:
name: temp_range
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
temp_optimum:
name: temp_optimum
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
salinity:
name: salinity
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
pressure:
name: pressure
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
ph:
name: ph
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
comments:
name: comments
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- assembly
- cancelled_user
- contact
- env_sample
- gold_analysis_project
- gold_sequencing_project
- img_group
- ora_aspnet_membership
- project_info
- project_info_04112013
- project_info_genbank_authors
- project_info_nitrogen_fixation
- request_account
- submission
- submission_history
- submission_proc_steps
- v5_ap_imperfect_view
- vsample
range: string
required: false
project_web_page:
name: project_web_page
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_type:
name: project_type
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_country:
name: seq_country
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
seq_status:
name: seq_status
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- submission
- vsample
range: string
required: false
seq_status_link:
name: seq_status_link
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
project_status:
name: project_status
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- t_all_gold_jgi_projects
range: string
required: false
library_method:
name: library_method
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
binning_method:
name: binning_method
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
assembly_method:
name: assembly_method
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: string
required: false
seq_depth:
name: seq_depth
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
gene_calling_method:
name: gene_calling_method
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
contig_count:
name: contig_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- v5_ap_imperfect_view
- vsample
range: integer
required: false
est_size:
name: est_size
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
units:
name: units
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
gene_count:
name: gene_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: integer
required: false
gc_perc:
name: gc_perc
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: float
required: false
chromosome_count:
name: chromosome_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: integer
required: false
plasmid_count:
name: plasmid_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: integer
required: false
singlet_count:
name: singlet_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
completion_date:
name: completion_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- project_info
- project_info_04112013
range: datetime
required: false
contact_name:
name: contact_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
contact_email:
name: contact_email
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_study
- project_info
- project_info_04112013
- submission
range: string
required: false
contact_url:
name: contact_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
img_oid:
name: img_oid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_img_nat_prod_entity
- project_info
- project_info_04112013
- project_info_natural_prods
- project_info_nprods_metadata
- vsample
range: integer
required: false
gcat_id:
name: gcat_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
greengenes_id:
name: greengenes_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
strain_info_id:
name: strain_info_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
refseq_ids:
name: refseq_ids
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
refseq_link_url:
name: refseq_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
map_link_url:
name: map_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
wiki_link_url:
name: wiki_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
information_name:
name: information_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
information_url:
name: information_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
add_date:
name: add_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
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- env_sample
- gold_sequencing_project
- img_group
- img_group_news
- not_to_release
- perferred_mbin_queue
- project_info
- project_info_04112013
- rnaseq_notify_phajek
- rnaseq_notify_phajek_dev
- study_load
- vsample
range: datetime
required: false
mod_date:
name: mod_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- announcement
- cancelled_user
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- img_group_news
- lanl_project
- ornl_project
- project_info
- project_info_04112013
- project_info_natural_prods
- request_account
- study_load
- submission
- submission_history
- vsample
range: datetime
required: false
modified_by:
name: modified_by
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- announcement
- cancelled_user
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- project_info_natural_prods
- request_account
- submission
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- vsample
range: integer
required: false
availability:
name: availability
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
contact_oid:
name: contact_oid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
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- contact
- contact_img_groups
- contact_jgi_accounts
- contact_project_permissions
- contact_protexp_permissions
- contact_rna_data_permissions
- contact_rnaexp_permissions
- contact_sample_permissions
- contact_sample_perms
- contact_snp_exp_permissions
- contact_taxon_permissions
- contact_workspace_group
- gold_sequencing_project
- gold_study
- project_info
- project_info_04112013
- public_workspace
range: integer
required: false
genome_count:
name: genome_count
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
web_page_code:
name: web_page_code
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
pub_journal:
name: pub_journal
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
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- project_info
- project_info_04112013
- vsample
range: string
required: false
pub_vol:
name: pub_vol
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
pub_link:
name: pub_link
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
iso_year:
name: iso_year
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
iso_country:
name: iso_country
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
geo_location:
name: geo_location
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
loc_coord:
name: loc_coord
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cell_diameter:
name: cell_diameter
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cell_length:
name: cell_length
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
color:
name: color
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_project_name:
name: ncbi_project_name
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- vsample
range: string
required: false
latitude:
name: latitude
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- countrycv
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
longitude:
name: longitude
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- countrycv
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
altitude:
name: altitude
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
gram_stain:
name: gram_stain
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
host_name:
name: host_name
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_taxon_id:
name: host_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
host_gender:
name: host_gender
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_age:
name: host_age
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_health:
name: host_health
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
biotic_rel:
name: biotic_rel
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
symbiotic_interaction:
name: symbiotic_interaction
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
symbiotic_rel:
name: symbiotic_rel
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_archive_id:
name: ncbi_archive_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
iso_pubmed_id:
name: iso_pubmed_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
depth:
name: depth
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- plan_table
- project_info
- project_info_04112013
- vsample
range: string
required: false
vector:
name: vector
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_spec:
name: host_spec
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
iso_comments:
name: iso_comments
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
iso_source:
name: iso_source
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
habitat_category:
name: habitat_category
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_race:
name: host_race
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_isolation_bodysite:
name: hmp_isolation_bodysite
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_isolation_bodysubsite:
name: hmp_isolation_bodysubsite
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_comments:
name: host_comments
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_id:
name: hmp_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: integer
required: false
ncbi_submit_status:
name: ncbi_submit_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
locus_tag:
name: locus_tag
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
funding_program:
name: funding_program
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
short_read_archive_id:
name: short_read_archive_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_quality:
name: seq_quality
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
type_strain:
name: type_strain
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
homd_id:
name: homd_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_medication:
name: host_medication
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
proj_desc:
name: proj_desc
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
otu:
name: otu
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
no_of_reads:
name: no_of_reads
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
additional_body_sample_site:
name: additional_body_sample_site
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_goal:
name: project_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
bei_status:
name: bei_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
biosafety_level:
name: biosafety_level
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
isolate_selected:
name: isolate_selected
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_iso_comments:
name: hmp_iso_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_iso_avail_comments:
name: hmp_iso_avail_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_project_comments:
name: hmp_project_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_dna_received:
name: hmp_dna_received
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_date_dna_received:
name: hmp_date_dna_received
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
hmp_project_status:
name: hmp_project_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
body_product:
name: body_product
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_body_products
- vsample
range: string
required: false
hmp_seq_begin_date:
name: hmp_seq_begin_date
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
hmp_draft_seq_completion_date:
name: hmp_draft_seq_completion_date
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
proteomics_data:
name: proteomics_data
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
proteomics_link_url:
name: proteomics_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
transcriptomics_data:
name: transcriptomics_data
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
transcriptomics_link_url:
name: transcriptomics_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
organism_comments:
name: organism_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
iso_method:
name: iso_method
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
id_16s:
name: id_16s
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
show_in_dacc:
name: show_in_dacc
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_isolate_selection_source:
name: hmp_isolate_selection_source
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ecosystem:
name: ecosystem
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- cvecosystem
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_category:
name: ecosystem_category
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- cvecosystem_category
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_type:
name: ecosystem_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- cvecosystem_type
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_subtype:
name: ecosystem_subtype
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- cvecosystem_subtype
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
specific_ecosystem:
name: specific_ecosystem
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- cvspecific_ecosystem
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
image_url:
name: image_url
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
submitters_project_name:
name: submitters_project_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_center_proj_id:
name: seq_center_proj_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
proposal_name:
name: proposal_name
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
range: string
required: false
dacc_display:
name: dacc_display
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
pmid:
name: pmid
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
doi_id:
name: doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
publication_date:
name: publication_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_ap_publications
- gold_sp_genome_publications
- project_info
- project_info_04112013
range: datetime
required: false
sample_oid:
name: sample_oid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- contact_sample_perms
- env_sample
- env_sample_data_links
- env_sample_diseases
- env_sample_energy_source
- env_sample_habitat_type
- env_sample_jgi_url
- env_sample_metabolism
- env_sample_misc_meta_data
- env_sample_phenotypes
- env_sample_seq_method
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- submission
- submission_samples
- vsample
range: integer
required: false
finishing_goal:
name: finishing_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
current_finishing_status:
name: current_finishing_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
scope_of_work:
name: scope_of_work
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
bioproject_relevance:
name: bioproject_relevance
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
pmo_project_id:
name: pmo_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- assembly
- env_sample
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_sequencing_project
- goldv5_view
- project_info
- project_info_04112013
range: integer
required: false
img_contact:
name: img_contact
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
jgi_proposal_id:
name: jgi_proposal_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
scientific_program:
name: scientific_program
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
range: string
required: false
jgi_project_type:
name: jgi_project_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_status:
name: jgi_status
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
gpts_comments:
name: gpts_comments
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
gpts_last_mod_date:
name: gpts_last_mod_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
jgi_funding_program:
name: jgi_funding_program
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_dir_number:
name: jgi_dir_number
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
jgi_visibility:
name: jgi_visibility
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
growth_conditions:
name: growth_conditions
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
coordinate_type:
name: coordinate_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_final_deliverable:
name: jgi_final_deliverable
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_product_name:
name: jgi_product_name
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_funding_year:
name: jgi_funding_year
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
jgi_sequencing_goal:
name: jgi_sequencing_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
reviewed:
name: reviewed
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
organism_type:
name: organism_type
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cultured:
name: cultured
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
uncultured_type:
name: uncultured_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
nucleic_acid_type:
name: nucleic_acid_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
culture_type:
name: culture_type
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- gold_sequencing_project
- pig_retractions
- project_info
- project_info_04112013
range: string
required: false
gpts_ncbi_scientific_name:
name: gpts_ncbi_scientific_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
gpts_bioclassification_name:
name: gpts_bioclassification_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
scaffold_count:
name: scaffold_count
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- submission
- v5_ap_imperfect_view
range: integer
required: false
bioproject_accession:
name: bioproject_accession
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- load_genbank_prok_data
- ncbi_accessions
- ncbi_accessions_jbtest
- project_info
- project_info_04112013
range: string
required: false
show_in_gold:
name: show_in_gold
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
gpts_embargo_start_date:
name: gpts_embargo_start_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
gpts_embargo_days:
name: gpts_embargo_days
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
gpts_public_release_date:
name: gpts_public_release_date
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
phase:
name: phase
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
phase_status:
name: phase_status
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
related_project_oid:
name: related_project_oid
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
its_spid:
name: its_spid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- assembly
- env_sample
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_sequencing_project
- goldv5_view
- project_info
- project_info_04112013
- rnaseq_notify_phajek
- rnaseq_notify_phajek_dev
- t_all_gold_jgi_projects
range: integer
required: false
bioproject_description:
name: bioproject_description
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
bioproject_name:
name: bioproject_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
- study_load
range: string
required: false
bioproject_title:
name: bioproject_title
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
its_proposal_id:
name: its_proposal_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- study_load
range: integer
required: false
other_hosts:
name: other_hosts
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
known_non_hosts:
name: known_non_hosts
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
commercial_comments:
name: commercial_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
commercial:
name: commercial
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
taxon_doi_id:
name: taxon_doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
exemplar_doi_id:
name: exemplar_doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
exemplar_name:
name: exemplar_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_comments:
name: project_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
annotator_comments:
name: annotator_comments
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
biosample_accession:
name: biosample_accession
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- biosample
- biosample_attribute
- env_sample
- gold_sequencing_project
- load_genbank_prok_data
- project_info
- project_info_04112013
range: string
required: false
subspecies:
name: subspecies
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
er_sample_id:
name: er_sample_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- goldv5_view
- project_info
- project_info_04112013
range: string
required: false
strain_habitat:
name: strain_habitat
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: string
required: false
its_spid_old:
name: its_spid_old
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
fk_study_id:
name: fk_study_id
description: Foreign key to study
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
domain_of:
- project_info
- project_info_04112013
range: study
required: false
img_exp_oid:
name: img_exp_oid
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
goldv5_project_id:
name: goldv5_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project_lookup
- project_info
range: integer
required: false
viral_group:
name: viral_group
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
range: string
required: false
viral_subgroup:
name: viral_subgroup
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_sequencing_project
- project_info
range: string
required: false
genbank_low_quality_annotation:
name: genbank_low_quality_annotation
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- project_info
range: string
required: false
genbank_low_quality_genome:
name: genbank_low_quality_genome
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project
- project_info
range: string
required: false
assembly_accession:
name: assembly_accession
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- gold_analysis_project_genbanks
- gold_ap_genbank
- load_genbank_prok_data
- ncbi_accessions
- ncbi_accessions_jbtest
- project_info
range: string
required: false
legacy_gold_id:
name: legacy_gold_id
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_analysis_project_lookup
- goldv5_view
- project_info
- study_load
range: string
required: false
clade:
name: clade
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
ecotype:
name: ecotype
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
longhurst_code:
name: longhurst_code
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
longhurst_description:
name: longhurst_description
from_schema: https://w3id.org/jgi/imgsg_dev
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
Induced
name: project_info
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
project_oid:
name: project_oid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: project_oid
owner: project_info
domain_of:
- bioproject_propagation
- biosample
- data_quality_flags
- env_sample_soil_metadata
- genbank_refseq_crossover
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_img_nat_prod_entity
- ncbi_accessions
- ncbi_accessions_jbtest
- proj_info_cell_arrange_042014
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_body_products
- project_info_body_sites
- project_info_cell_arrangement
- project_info_collaborators
- project_info_cyano_metadata
- project_info_data_links
- project_info_data_links_112013
- project_info_diseases
- project_info_energy_source
- project_info_habitat
- project_info_jgi_url
- project_info_metabolism
- project_info_natural_prods
- project_info_nitrogen_fixation
- project_info_nprods_metadata
- project_info_phenotypes
- project_info_project_relevance
- project_info_seq_method
- project_meta_updates
- study_load
- t_alex_test
- t_all_gold_jgi_projects
range: integer
required: false
gold_stamp_id:
name: gold_stamp_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: gold_stamp_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
- vsample
range: string
required: false
gold_id_old:
name: gold_id_old
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: gold_id_old
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
display_name:
name: display_name
from_schema: https://w3id.org/jgi/imgsg_dev
alias: display_name
owner: project_info
domain_of:
- genbank_refseq_crossover
- gold_sequencing_project
- organism_sort
- pig_genbank_emailed_accs
- pig_reruns
- pig_retractions
- pig_tracks
- project_info
- project_info_04112013
range: string
required: false
common_name:
name: common_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: common_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
genus:
name: genus
from_schema: https://w3id.org/jgi/imgsg_dev
alias: genus
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
genus_synonyms:
name: genus_synonyms
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: genus_synonyms
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
species:
name: species
from_schema: https://w3id.org/jgi/imgsg_dev
alias: species
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
species_synonyms:
name: species_synonyms
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: species_synonyms
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
strain:
name: strain
from_schema: https://w3id.org/jgi/imgsg_dev
alias: strain
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- project_info_biosample
range: string
required: false
serovar:
name: serovar
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: serovar
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
phylogeny:
name: phylogeny
from_schema: https://w3id.org/jgi/imgsg_dev
alias: phylogeny
owner: project_info
domain_of:
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
range: string
required: false
ncbi_taxon_id:
name: ncbi_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_taxon_id
owner: project_info
domain_of:
- env_sample
- genbank_refseq_crossover
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- project_info_bioproject
range: string
required: false
ncbi_superkingdom:
name: ncbi_superkingdom
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_superkingdom
owner: project_info
domain_of:
- gold_analysis_project
- project_info
- project_info_04112013
range: string
required: false
domain:
name: domain
from_schema: https://w3id.org/jgi/imgsg_dev
alias: domain
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_phylum:
name: ncbi_phylum
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_phylum
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_class:
name: ncbi_class
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_class
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_order:
name: ncbi_order
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_order
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_family:
name: ncbi_family
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_family
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_genus:
name: ncbi_genus
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_genus
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
ncbi_species:
name: ncbi_species
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_species
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- organism_sort
- project_info
- project_info_04112013
- v5_ap_imperfect_view
range: string
required: false
culture_collection:
name: culture_collection
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: culture_collection
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_project_id:
name: ncbi_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_project_id
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- study_load
- vsample
range: integer
required: false
symbiont:
name: symbiont
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: symbiont
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
symbiont_taxon_id:
name: symbiont_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: symbiont_taxon_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
isolation:
name: isolation
from_schema: https://w3id.org/jgi/imgsg_dev
alias: isolation
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
oxygen_req:
name: oxygen_req
from_schema: https://w3id.org/jgi/imgsg_dev
alias: oxygen_req
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
cell_shape:
name: cell_shape
from_schema: https://w3id.org/jgi/imgsg_dev
alias: cell_shape
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
motility:
name: motility
from_schema: https://w3id.org/jgi/imgsg_dev
alias: motility
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
sporulation:
name: sporulation
from_schema: https://w3id.org/jgi/imgsg_dev
alias: sporulation
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
temp_range:
name: temp_range
from_schema: https://w3id.org/jgi/imgsg_dev
alias: temp_range
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
temp_optimum:
name: temp_optimum
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: temp_optimum
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
salinity:
name: salinity
from_schema: https://w3id.org/jgi/imgsg_dev
alias: salinity
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
pressure:
name: pressure
from_schema: https://w3id.org/jgi/imgsg_dev
alias: pressure
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
ph:
name: ph
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ph
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
comments:
name: comments
from_schema: https://w3id.org/jgi/imgsg_dev
alias: comments
owner: project_info
domain_of:
- assembly
- cancelled_user
- contact
- env_sample
- gold_analysis_project
- gold_sequencing_project
- img_group
- ora_aspnet_membership
- project_info
- project_info_04112013
- project_info_genbank_authors
- project_info_nitrogen_fixation
- request_account
- submission
- submission_history
- submission_proc_steps
- v5_ap_imperfect_view
- vsample
range: string
required: false
project_web_page:
name: project_web_page
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: project_web_page
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_type:
name: project_type
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: project_type
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_country:
name: seq_country
from_schema: https://w3id.org/jgi/imgsg_dev
alias: seq_country
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
seq_status:
name: seq_status
from_schema: https://w3id.org/jgi/imgsg_dev
alias: seq_status
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- submission
- vsample
range: string
required: false
seq_status_link:
name: seq_status_link
from_schema: https://w3id.org/jgi/imgsg_dev
alias: seq_status_link
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
project_status:
name: project_status
from_schema: https://w3id.org/jgi/imgsg_dev
alias: project_status
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- t_all_gold_jgi_projects
range: string
required: false
library_method:
name: library_method
from_schema: https://w3id.org/jgi/imgsg_dev
alias: library_method
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
binning_method:
name: binning_method
from_schema: https://w3id.org/jgi/imgsg_dev
alias: binning_method
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
assembly_method:
name: assembly_method
from_schema: https://w3id.org/jgi/imgsg_dev
alias: assembly_method
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: string
required: false
seq_depth:
name: seq_depth
from_schema: https://w3id.org/jgi/imgsg_dev
alias: seq_depth
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
gene_calling_method:
name: gene_calling_method
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gene_calling_method
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
contig_count:
name: contig_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: contig_count
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- v5_ap_imperfect_view
- vsample
range: integer
required: false
est_size:
name: est_size
from_schema: https://w3id.org/jgi/imgsg_dev
alias: est_size
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
units:
name: units
from_schema: https://w3id.org/jgi/imgsg_dev
alias: units
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
gene_count:
name: gene_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gene_count
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- vsample
range: integer
required: false
gc_perc:
name: gc_perc
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gc_perc
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: float
required: false
chromosome_count:
name: chromosome_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: chromosome_count
owner: project_info
domain_of:
- env_sample
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: integer
required: false
plasmid_count:
name: plasmid_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: plasmid_count
owner: project_info
domain_of:
- env_sample
- pig_tracks
- project_info
- project_info_04112013
- project_info_genbank
- vsample
range: integer
required: false
singlet_count:
name: singlet_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: singlet_count
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
completion_date:
name: completion_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: completion_date
owner: project_info
domain_of:
- gold_analysis_project
- project_info
- project_info_04112013
range: datetime
required: false
contact_name:
name: contact_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: contact_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
contact_email:
name: contact_email
from_schema: https://w3id.org/jgi/imgsg_dev
alias: contact_email
owner: project_info
domain_of:
- gold_study
- project_info
- project_info_04112013
- submission
range: string
required: false
contact_url:
name: contact_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: contact_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
img_oid:
name: img_oid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: img_oid
owner: project_info
domain_of:
- env_sample
- gold_img_nat_prod_entity
- project_info
- project_info_04112013
- project_info_natural_prods
- project_info_nprods_metadata
- vsample
range: integer
required: false
gcat_id:
name: gcat_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: gcat_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
greengenes_id:
name: greengenes_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: greengenes_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
strain_info_id:
name: strain_info_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: strain_info_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
refseq_ids:
name: refseq_ids
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: refseq_ids
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
refseq_link_url:
name: refseq_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: refseq_link_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
map_link_url:
name: map_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: map_link_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
wiki_link_url:
name: wiki_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: wiki_link_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
information_name:
name: information_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: information_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
information_url:
name: information_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: information_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
add_date:
name: add_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: add_date
owner: project_info
domain_of:
- contact
- env_sample
- gold_sequencing_project
- img_group
- img_group_news
- not_to_release
- perferred_mbin_queue
- project_info
- project_info_04112013
- rnaseq_notify_phajek
- rnaseq_notify_phajek_dev
- study_load
- vsample
range: datetime
required: false
mod_date:
name: mod_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: mod_date
owner: project_info
domain_of:
- announcement
- cancelled_user
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- img_group_news
- lanl_project
- ornl_project
- project_info
- project_info_04112013
- project_info_natural_prods
- request_account
- study_load
- submission
- submission_history
- vsample
range: datetime
required: false
modified_by:
name: modified_by
from_schema: https://w3id.org/jgi/imgsg_dev
alias: modified_by
owner: project_info
domain_of:
- announcement
- cancelled_user
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- project_info_natural_prods
- request_account
- submission
- submission_history
- vsample
range: integer
required: false
availability:
name: availability
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: availability
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
contact_oid:
name: contact_oid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: contact_oid
owner: project_info
domain_of:
- analysis_project_permissions
- contact
- contact_img_groups
- contact_jgi_accounts
- contact_project_permissions
- contact_protexp_permissions
- contact_rna_data_permissions
- contact_rnaexp_permissions
- contact_sample_permissions
- contact_sample_perms
- contact_snp_exp_permissions
- contact_taxon_permissions
- contact_workspace_group
- gold_sequencing_project
- gold_study
- project_info
- project_info_04112013
- public_workspace
range: integer
required: false
genome_count:
name: genome_count
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: genome_count
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
web_page_code:
name: web_page_code
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: web_page_code
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
pub_journal:
name: pub_journal
from_schema: https://w3id.org/jgi/imgsg_dev
alias: pub_journal
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
pub_vol:
name: pub_vol
from_schema: https://w3id.org/jgi/imgsg_dev
alias: pub_vol
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
pub_link:
name: pub_link
from_schema: https://w3id.org/jgi/imgsg_dev
alias: pub_link
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
iso_year:
name: iso_year
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: iso_year
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
iso_country:
name: iso_country
from_schema: https://w3id.org/jgi/imgsg_dev
alias: iso_country
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
geo_location:
name: geo_location
from_schema: https://w3id.org/jgi/imgsg_dev
alias: geo_location
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
loc_coord:
name: loc_coord
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: loc_coord
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cell_diameter:
name: cell_diameter
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: cell_diameter
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cell_length:
name: cell_length
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: cell_length
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
color:
name: color
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: color
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_project_name:
name: ncbi_project_name
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_project_name
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- vsample
range: string
required: false
latitude:
name: latitude
from_schema: https://w3id.org/jgi/imgsg_dev
alias: latitude
owner: project_info
domain_of:
- countrycv
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
longitude:
name: longitude
from_schema: https://w3id.org/jgi/imgsg_dev
alias: longitude
owner: project_info
domain_of:
- countrycv
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
altitude:
name: altitude
from_schema: https://w3id.org/jgi/imgsg_dev
alias: altitude
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
gram_stain:
name: gram_stain
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gram_stain
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
host_name:
name: host_name
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_name
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_taxon_id:
name: host_taxon_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_taxon_id
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
host_gender:
name: host_gender
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_gender
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_age:
name: host_age
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_age
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_health:
name: host_health
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: host_health
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
biotic_rel:
name: biotic_rel
from_schema: https://w3id.org/jgi/imgsg_dev
alias: biotic_rel
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
symbiotic_interaction:
name: symbiotic_interaction
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: symbiotic_interaction
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
symbiotic_rel:
name: symbiotic_rel
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: symbiotic_rel
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ncbi_archive_id:
name: ncbi_archive_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ncbi_archive_id
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
iso_pubmed_id:
name: iso_pubmed_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: iso_pubmed_id
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
depth:
name: depth
from_schema: https://w3id.org/jgi/imgsg_dev
alias: depth
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- plan_table
- project_info
- project_info_04112013
- vsample
range: string
required: false
vector:
name: vector
from_schema: https://w3id.org/jgi/imgsg_dev
alias: vector
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
host_spec:
name: host_spec
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_spec
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: integer
required: false
iso_comments:
name: iso_comments
from_schema: https://w3id.org/jgi/imgsg_dev
alias: iso_comments
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
iso_source:
name: iso_source
from_schema: https://w3id.org/jgi/imgsg_dev
alias: iso_source
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
habitat_category:
name: habitat_category
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: habitat_category
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_race:
name: host_race
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_race
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_isolation_bodysite:
name: hmp_isolation_bodysite
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_isolation_bodysite
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_isolation_bodysubsite:
name: hmp_isolation_bodysubsite
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_isolation_bodysubsite
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_comments:
name: host_comments
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_comments
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_id:
name: hmp_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: hmp_id
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: integer
required: false
ncbi_submit_status:
name: ncbi_submit_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: ncbi_submit_status
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
locus_tag:
name: locus_tag
from_schema: https://w3id.org/jgi/imgsg_dev
alias: locus_tag
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
funding_program:
name: funding_program
from_schema: https://w3id.org/jgi/imgsg_dev
alias: funding_program
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
short_read_archive_id:
name: short_read_archive_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: short_read_archive_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_quality:
name: seq_quality
from_schema: https://w3id.org/jgi/imgsg_dev
alias: seq_quality
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- vsample
range: string
required: false
type_strain:
name: type_strain
from_schema: https://w3id.org/jgi/imgsg_dev
alias: type_strain
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
homd_id:
name: homd_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: homd_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
host_medication:
name: host_medication
from_schema: https://w3id.org/jgi/imgsg_dev
alias: host_medication
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
proj_desc:
name: proj_desc
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: proj_desc
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
otu:
name: otu
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: otu
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
no_of_reads:
name: no_of_reads
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: no_of_reads
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
additional_body_sample_site:
name: additional_body_sample_site
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: additional_body_sample_site
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_goal:
name: project_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: project_goal
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
bei_status:
name: bei_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: bei_status
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
biosafety_level:
name: biosafety_level
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: biosafety_level
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
isolate_selected:
name: isolate_selected
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: isolate_selected
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_iso_comments:
name: hmp_iso_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_iso_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_iso_avail_comments:
name: hmp_iso_avail_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_iso_avail_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_project_comments:
name: hmp_project_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_project_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_dna_received:
name: hmp_dna_received
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_dna_received
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
hmp_date_dna_received:
name: hmp_date_dna_received
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_date_dna_received
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
hmp_project_status:
name: hmp_project_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_project_status
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
body_product:
name: body_product
from_schema: https://w3id.org/jgi/imgsg_dev
alias: body_product
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_body_products
- vsample
range: string
required: false
hmp_seq_begin_date:
name: hmp_seq_begin_date
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_seq_begin_date
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
hmp_draft_seq_completion_date:
name: hmp_draft_seq_completion_date
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_draft_seq_completion_date
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: datetime
required: false
proteomics_data:
name: proteomics_data
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: proteomics_data
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
proteomics_link_url:
name: proteomics_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: proteomics_link_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
transcriptomics_data:
name: transcriptomics_data
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: transcriptomics_data
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
transcriptomics_link_url:
name: transcriptomics_link_url
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: transcriptomics_link_url
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
organism_comments:
name: organism_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: organism_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
iso_method:
name: iso_method
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: iso_method
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
id_16s:
name: id_16s
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: id_16s
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
show_in_dacc:
name: show_in_dacc
from_schema: https://w3id.org/jgi/imgsg_dev
alias: show_in_dacc
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
hmp_isolate_selection_source:
name: hmp_isolate_selection_source
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: hmp_isolate_selection_source
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
ecosystem:
name: ecosystem
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ecosystem
owner: project_info
domain_of:
- cvecosystem
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_category:
name: ecosystem_category
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ecosystem_category
owner: project_info
domain_of:
- cvecosystem_category
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_type:
name: ecosystem_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ecosystem_type
owner: project_info
domain_of:
- cvecosystem_type
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
ecosystem_subtype:
name: ecosystem_subtype
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ecosystem_subtype
owner: project_info
domain_of:
- cvecosystem_subtype
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
specific_ecosystem:
name: specific_ecosystem
from_schema: https://w3id.org/jgi/imgsg_dev
alias: specific_ecosystem
owner: project_info
domain_of:
- cvspecific_ecosystem
- env_sample
- gold_analysis_project
- gold_sequencing_project
- gold_study
- metagenomic_class_nodes
- metagenomic_class_nodes_new
- metagenomic_class_nodes_new_bk
- metagenomic_classification
- project_info
- project_info_04112013
- v5_ap_imperfect_view
- vsample
range: string
required: false
image_url:
name: image_url
from_schema: https://w3id.org/jgi/imgsg_dev
alias: image_url
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- vsample
range: string
required: false
submitters_project_name:
name: submitters_project_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: submitters_project_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
seq_center_proj_id:
name: seq_center_proj_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: seq_center_proj_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
proposal_name:
name: proposal_name
from_schema: https://w3id.org/jgi/imgsg_dev
alias: proposal_name
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
range: string
required: false
dacc_display:
name: dacc_display
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: dacc_display
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
pmid:
name: pmid
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: pmid
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
doi_id:
name: doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: doi_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
publication_date:
name: publication_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: publication_date
owner: project_info
domain_of:
- gold_ap_publications
- gold_sp_genome_publications
- project_info
- project_info_04112013
range: datetime
required: false
sample_oid:
name: sample_oid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: sample_oid
owner: project_info
domain_of:
- contact_sample_perms
- env_sample
- env_sample_data_links
- env_sample_diseases
- env_sample_energy_source
- env_sample_habitat_type
- env_sample_jgi_url
- env_sample_metabolism
- env_sample_misc_meta_data
- env_sample_phenotypes
- env_sample_seq_method
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
- submission
- submission_samples
- vsample
range: integer
required: false
finishing_goal:
name: finishing_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: finishing_goal
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
current_finishing_status:
name: current_finishing_status
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: current_finishing_status
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
scope_of_work:
name: scope_of_work
from_schema: https://w3id.org/jgi/imgsg_dev
alias: scope_of_work
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
bioproject_relevance:
name: bioproject_relevance
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: bioproject_relevance
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
pmo_project_id:
name: pmo_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: pmo_project_id
owner: project_info
domain_of:
- assembly
- env_sample
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_sequencing_project
- goldv5_view
- project_info
- project_info_04112013
range: integer
required: false
img_contact:
name: img_contact
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: img_contact
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
jgi_proposal_id:
name: jgi_proposal_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: jgi_proposal_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
scientific_program:
name: scientific_program
from_schema: https://w3id.org/jgi/imgsg_dev
alias: scientific_program
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
- project_info_bioproject
- project_info_biosample
range: string
required: false
jgi_project_type:
name: jgi_project_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_project_type
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_status:
name: jgi_status
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_status
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
gpts_comments:
name: gpts_comments
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gpts_comments
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
gpts_last_mod_date:
name: gpts_last_mod_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gpts_last_mod_date
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
jgi_funding_program:
name: jgi_funding_program
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_funding_program
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_dir_number:
name: jgi_dir_number
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_dir_number
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
jgi_visibility:
name: jgi_visibility
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_visibility
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
growth_conditions:
name: growth_conditions
from_schema: https://w3id.org/jgi/imgsg_dev
alias: growth_conditions
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
coordinate_type:
name: coordinate_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: coordinate_type
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_final_deliverable:
name: jgi_final_deliverable
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_final_deliverable
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_product_name:
name: jgi_product_name
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_product_name
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
jgi_funding_year:
name: jgi_funding_year
from_schema: https://w3id.org/jgi/imgsg_dev
alias: jgi_funding_year
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
jgi_sequencing_goal:
name: jgi_sequencing_goal
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: jgi_sequencing_goal
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
reviewed:
name: reviewed
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: reviewed
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
organism_type:
name: organism_type
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: organism_type
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
cultured:
name: cultured
from_schema: https://w3id.org/jgi/imgsg_dev
alias: cultured
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
uncultured_type:
name: uncultured_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: uncultured_type
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- project_info
- project_info_04112013
range: string
required: false
nucleic_acid_type:
name: nucleic_acid_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: nucleic_acid_type
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
culture_type:
name: culture_type
from_schema: https://w3id.org/jgi/imgsg_dev
alias: culture_type
owner: project_info
domain_of:
- gold_analysis_project
- gold_sequencing_project
- pig_retractions
- project_info
- project_info_04112013
range: string
required: false
gpts_ncbi_scientific_name:
name: gpts_ncbi_scientific_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: gpts_ncbi_scientific_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
gpts_bioclassification_name:
name: gpts_bioclassification_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: gpts_bioclassification_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
scaffold_count:
name: scaffold_count
from_schema: https://w3id.org/jgi/imgsg_dev
alias: scaffold_count
owner: project_info
domain_of:
- env_sample
- gold_analysis_project
- project_info
- project_info_04112013
- submission
- v5_ap_imperfect_view
range: integer
required: false
bioproject_accession:
name: bioproject_accession
from_schema: https://w3id.org/jgi/imgsg_dev
alias: bioproject_accession
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- load_genbank_prok_data
- ncbi_accessions
- ncbi_accessions_jbtest
- project_info
- project_info_04112013
range: string
required: false
show_in_gold:
name: show_in_gold
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: show_in_gold
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
gpts_embargo_start_date:
name: gpts_embargo_start_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gpts_embargo_start_date
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
gpts_embargo_days:
name: gpts_embargo_days
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gpts_embargo_days
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
gpts_public_release_date:
name: gpts_public_release_date
from_schema: https://w3id.org/jgi/imgsg_dev
alias: gpts_public_release_date
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: datetime
required: false
phase:
name: phase
from_schema: https://w3id.org/jgi/imgsg_dev
alias: phase
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
phase_status:
name: phase_status
from_schema: https://w3id.org/jgi/imgsg_dev
alias: phase_status
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
related_project_oid:
name: related_project_oid
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: related_project_oid
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: integer
required: false
its_spid:
name: its_spid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: its_spid
owner: project_info
domain_of:
- assembly
- env_sample
- gold_analysis_project_lookup
- gold_analysis_project_lookup2
- gold_sequencing_project
- goldv5_view
- project_info
- project_info_04112013
- rnaseq_notify_phajek
- rnaseq_notify_phajek_dev
- t_all_gold_jgi_projects
range: integer
required: false
bioproject_description:
name: bioproject_description
from_schema: https://w3id.org/jgi/imgsg_dev
alias: bioproject_description
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
bioproject_name:
name: bioproject_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: bioproject_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
- study_load
range: string
required: false
bioproject_title:
name: bioproject_title
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: bioproject_title
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
its_proposal_id:
name: its_proposal_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: its_proposal_id
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
- project_info_04112013
- study_load
range: integer
required: false
other_hosts:
name: other_hosts
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: other_hosts
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
known_non_hosts:
name: known_non_hosts
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: known_non_hosts
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
commercial_comments:
name: commercial_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: commercial_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
commercial:
name: commercial
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: commercial
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
taxon_doi_id:
name: taxon_doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: taxon_doi_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
exemplar_doi_id:
name: exemplar_doi_id
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: exemplar_doi_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
exemplar_name:
name: exemplar_name
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: exemplar_name
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
project_comments:
name: project_comments
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: project_comments
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
annotator_comments:
name: annotator_comments
from_schema: https://w3id.org/jgi/imgsg_dev
alias: annotator_comments
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
biosample_accession:
name: biosample_accession
from_schema: https://w3id.org/jgi/imgsg_dev
alias: biosample_accession
owner: project_info
domain_of:
- biosample
- biosample_attribute
- env_sample
- gold_sequencing_project
- load_genbank_prok_data
- project_info
- project_info_04112013
range: string
required: false
subspecies:
name: subspecies
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: subspecies
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
er_sample_id:
name: er_sample_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: er_sample_id
owner: project_info
domain_of:
- goldv5_view
- project_info
- project_info_04112013
range: string
required: false
strain_habitat:
name: strain_habitat
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: strain_habitat
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: string
required: false
its_spid_old:
name: its_spid_old
from_schema: https://w3id.org/jgi/imgsg_dev
alias: its_spid_old
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: integer
required: false
fk_study_id:
name: fk_study_id
description: Foreign key to study
from_schema: https://w3id.org/jgi/imgsg_dev
rank: 1000
alias: fk_study_id
owner: project_info
domain_of:
- project_info
- project_info_04112013
range: study
required: false
img_exp_oid:
name: img_exp_oid
from_schema: https://w3id.org/jgi/imgsg_dev
alias: img_exp_oid
owner: project_info
domain_of:
- env_sample
- project_info
- project_info_04112013
range: string
required: false
goldv5_project_id:
name: goldv5_project_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: goldv5_project_id
owner: project_info
domain_of:
- env_sample
- gold_analysis_project_lookup
- project_info
range: integer
required: false
viral_group:
name: viral_group
from_schema: https://w3id.org/jgi/imgsg_dev
alias: viral_group
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
range: string
required: false
viral_subgroup:
name: viral_subgroup
from_schema: https://w3id.org/jgi/imgsg_dev
alias: viral_subgroup
owner: project_info
domain_of:
- gold_sequencing_project
- project_info
range: string
required: false
genbank_low_quality_annotation:
name: genbank_low_quality_annotation
from_schema: https://w3id.org/jgi/imgsg_dev
alias: genbank_low_quality_annotation
owner: project_info
domain_of:
- gold_analysis_project
- project_info
range: string
required: false
genbank_low_quality_genome:
name: genbank_low_quality_genome
from_schema: https://w3id.org/jgi/imgsg_dev
alias: genbank_low_quality_genome
owner: project_info
domain_of:
- gold_analysis_project
- project_info
range: string
required: false
assembly_accession:
name: assembly_accession
from_schema: https://w3id.org/jgi/imgsg_dev
alias: assembly_accession
owner: project_info
domain_of:
- gold_analysis_project_genbanks
- gold_ap_genbank
- load_genbank_prok_data
- ncbi_accessions
- ncbi_accessions_jbtest
- project_info
range: string
required: false
legacy_gold_id:
name: legacy_gold_id
from_schema: https://w3id.org/jgi/imgsg_dev
alias: legacy_gold_id
owner: project_info
domain_of:
- env_sample
- gold_analysis_project_lookup
- goldv5_view
- project_info
- study_load
range: string
required: false
clade:
name: clade
from_schema: https://w3id.org/jgi/imgsg_dev
alias: clade
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
ecotype:
name: ecotype
from_schema: https://w3id.org/jgi/imgsg_dev
alias: ecotype
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
longhurst_code:
name: longhurst_code
from_schema: https://w3id.org/jgi/imgsg_dev
alias: longhurst_code
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false
longhurst_description:
name: longhurst_description
from_schema: https://w3id.org/jgi/imgsg_dev
alias: longhurst_description
owner: project_info
domain_of:
- env_sample
- gold_sequencing_project
- project_info
range: string
required: false