Class: ProjectInfoCyanoMetadata

URI: imgsg_dev:ProjectInfoCyanoMetadata

classDiagram class ProjectInfoCyanoMetadata click ProjectInfoCyanoMetadata href "../ProjectInfoCyanoMetadata/" ProjectInfoCyanoMetadata : bloom_forming ProjectInfoCyanoMetadata : body_inclusion ProjectInfoCyanoMetadata : branching ProjectInfoCyanoMetadata : carotenoids ProjectInfoCyanoMetadata : compl_chromatic_adaptation ProjectInfoCyanoMetadata : cysts ProjectInfoCyanoMetadata : developmental_cycle ProjectInfoCyanoMetadata : differentiated_cells ProjectInfoCyanoMetadata : extracellular_structures ProjectInfoCyanoMetadata : filament_type ProjectInfoCyanoMetadata : filaments ProjectInfoCyanoMetadata : gas_vesicle_type ProjectInfoCyanoMetadata : gas_vesicles ProjectInfoCyanoMetadata : heterocysts_position ProjectInfoCyanoMetadata : medium_type ProjectInfoCyanoMetadata : phage_infectivity ProjectInfoCyanoMetadata : phage_type ProjectInfoCyanoMetadata : pigment_type ProjectInfoCyanoMetadata : pigments ProjectInfoCyanoMetadata : project_oid ProjectInfoCyanoMetadata : reproduction_mode ProjectInfoCyanoMetadata : restriction_enzyme ProjectInfoCyanoMetadata : secondary_metabolites ProjectInfoCyanoMetadata : toxin_production ProjectInfoCyanoMetadata : toxin_type ProjectInfoCyanoMetadata : trichome ProjectInfoCyanoMetadata : trichome_type

Slots

Name	Cardinality and Range	Inheritance
project_oid	0..1 Integer	direct
filaments	0..1 String	direct
cysts	0..1 String	direct
differentiated_cells	0..1 String	direct
heterocysts_position	0..1 String	direct
reproduction_mode	0..1 String	direct
trichome	0..1 String	direct
trichome_type	0..1 String	direct
pigments	0..1 String	direct
phage_infectivity	0..1 String	direct
phage_type	0..1 String	direct
carotenoids	0..1 String	direct
restriction_enzyme	0..1 String	direct
toxin_production	0..1 String	direct
toxin_type	0..1 String	direct
developmental_cycle	0..1 String	direct
branching	0..1 String	direct
gas_vesicles	0..1 String	direct
gas_vesicle_type	0..1 String	direct
body_inclusion	0..1 String	direct
secondary_metabolites	0..1 String	direct
extracellular_structures	0..1 String	direct
bloom_forming	0..1 String	direct
pigment_type	0..1 String	direct
compl_chromatic_adaptation	0..1 String	direct
medium_type	0..1 String	direct
filament_type	0..1 String	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/jgi/imgsg_dev

Mappings

Mapping Type	Mapped Value
self	imgsg_dev:ProjectInfoCyanoMetadata
native	imgsg_dev:ProjectInfoCyanoMetadata

LinkML Source

Direct

name: project_info_cyano_metadata
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    domain_of:
    - bioproject_propagation
    - biosample
    - data_quality_flags
    - env_sample_soil_metadata
    - genbank_refseq_crossover
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - proj_info_cell_arrange_042014
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_body_products
    - project_info_body_sites
    - project_info_cell_arrangement
    - project_info_collaborators
    - project_info_cyano_metadata
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_diseases
    - project_info_energy_source
    - project_info_habitat
    - project_info_jgi_url
    - project_info_metabolism
    - project_info_natural_prods
    - project_info_nitrogen_fixation
    - project_info_nprods_metadata
    - project_info_phenotypes
    - project_info_project_relevance
    - project_info_seq_method
    - project_meta_updates
    - study_load
    - t_alex_test
    - t_all_gold_jgi_projects
    range: integer
    required: false
  filaments:
    name: filaments
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  cysts:
    name: cysts
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  differentiated_cells:
    name: differentiated_cells
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  heterocysts_position:
    name: heterocysts_position
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  reproduction_mode:
    name: reproduction_mode
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  trichome:
    name: trichome
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  trichome_type:
    name: trichome_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  pigments:
    name: pigments
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  phage_infectivity:
    name: phage_infectivity
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  phage_type:
    name: phage_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  carotenoids:
    name: carotenoids
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  restriction_enzyme:
    name: restriction_enzyme
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  toxin_production:
    name: toxin_production
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  toxin_type:
    name: toxin_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  developmental_cycle:
    name: developmental_cycle
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  branching:
    name: branching
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  gas_vesicles:
    name: gas_vesicles
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  gas_vesicle_type:
    name: gas_vesicle_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  body_inclusion:
    name: body_inclusion
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  secondary_metabolites:
    name: secondary_metabolites
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  extracellular_structures:
    name: extracellular_structures
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  bloom_forming:
    name: bloom_forming
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  pigment_type:
    name: pigment_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  compl_chromatic_adaptation:
    name: compl_chromatic_adaptation
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  medium_type:
    name: medium_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  filament_type:
    name: filament_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false

Induced

name: project_info_cyano_metadata
from_schema: https://w3id.org/jgi/imgsg_dev
attributes:
  project_oid:
    name: project_oid
    from_schema: https://w3id.org/jgi/imgsg_dev
    alias: project_oid
    owner: project_info_cyano_metadata
    domain_of:
    - bioproject_propagation
    - biosample
    - data_quality_flags
    - env_sample_soil_metadata
    - genbank_refseq_crossover
    - gold_analysis_project_lookup
    - gold_analysis_project_lookup2
    - gold_img_nat_prod_entity
    - ncbi_accessions
    - ncbi_accessions_jbtest
    - proj_info_cell_arrange_042014
    - project_info
    - project_info_04112013
    - project_info_bioproject
    - project_info_body_products
    - project_info_body_sites
    - project_info_cell_arrangement
    - project_info_collaborators
    - project_info_cyano_metadata
    - project_info_data_links
    - project_info_data_links_112013
    - project_info_diseases
    - project_info_energy_source
    - project_info_habitat
    - project_info_jgi_url
    - project_info_metabolism
    - project_info_natural_prods
    - project_info_nitrogen_fixation
    - project_info_nprods_metadata
    - project_info_phenotypes
    - project_info_project_relevance
    - project_info_seq_method
    - project_meta_updates
    - study_load
    - t_alex_test
    - t_all_gold_jgi_projects
    range: integer
    required: false
  filaments:
    name: filaments
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: filaments
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  cysts:
    name: cysts
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: cysts
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  differentiated_cells:
    name: differentiated_cells
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: differentiated_cells
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  heterocysts_position:
    name: heterocysts_position
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: heterocysts_position
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  reproduction_mode:
    name: reproduction_mode
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: reproduction_mode
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  trichome:
    name: trichome
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: trichome
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  trichome_type:
    name: trichome_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: trichome_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  pigments:
    name: pigments
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: pigments
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  phage_infectivity:
    name: phage_infectivity
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: phage_infectivity
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  phage_type:
    name: phage_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: phage_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  carotenoids:
    name: carotenoids
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: carotenoids
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  restriction_enzyme:
    name: restriction_enzyme
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: restriction_enzyme
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  toxin_production:
    name: toxin_production
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: toxin_production
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  toxin_type:
    name: toxin_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: toxin_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  developmental_cycle:
    name: developmental_cycle
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: developmental_cycle
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  branching:
    name: branching
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: branching
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  gas_vesicles:
    name: gas_vesicles
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: gas_vesicles
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  gas_vesicle_type:
    name: gas_vesicle_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: gas_vesicle_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  body_inclusion:
    name: body_inclusion
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: body_inclusion
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  secondary_metabolites:
    name: secondary_metabolites
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: secondary_metabolites
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  extracellular_structures:
    name: extracellular_structures
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: extracellular_structures
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  bloom_forming:
    name: bloom_forming
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: bloom_forming
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  pigment_type:
    name: pigment_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: pigment_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  compl_chromatic_adaptation:
    name: compl_chromatic_adaptation
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: compl_chromatic_adaptation
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  medium_type:
    name: medium_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: medium_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false
  filament_type:
    name: filament_type
    from_schema: https://w3id.org/jgi/imgsg_dev
    rank: 1000
    alias: filament_type
    owner: project_info_cyano_metadata
    domain_of:
    - project_info_cyano_metadata
    range: string
    required: false